Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 AC006213.6-201ENST00000623722 4179 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SCN2BO60939 AL049634.1-201ENST00000453770 1720 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SCN2BO60939 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SCN2BO60939 RNA5SP321-201ENST00000362722 111 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 AL359092.1-201ENST00000417156 265 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SCN2BO60939 PUDPP2-201ENST00000431423 643 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 AC009237.1-201ENST00000442127 744 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN2BO60939 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN2BO60939 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SCN2BO60939 RN7SL868P-201ENST00000485915 303 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 RN7SL37P-201ENST00000490461 307 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 AL390198.2-201ENST00000510553 222 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN2BO60939 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
SCN2BO60939 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN2BO60939 AC103855.4-201ENST00000533158 265 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.2□□□□□ -1.42
SCN2BO60939 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 AL162632.2-201ENST00000553933 399 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 AC126323.4-201ENST00000566935 234 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN2BO60939 MIR378C-201ENST00000578683 81 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN2BO60939 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN2BO60939 AC018690.1-201ENST00000608144 626 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN2BO60939 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN2BO60939 AC009283.1-201ENST00000615852 645 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.2□□□□□ -1.42
SCN2BO60939 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN2BO60939 AC073488.9-201ENST00000631601 754 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN2BO60939 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SCN2BO60939 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SCN2BO60939 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN2BO60939 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.2□□□□□ -1.42
SCN2BO60939 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN2BO60939 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 AC092701.1-201ENST00000623627 1551 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.19□□□□□ -1.42
SCN2BO60939 SNX18P3-202ENST00000565670 1750 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 AC137056.2-201ENST00000624055 1958 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 SNORA38B-201ENST00000363524 131 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 SNORA70H-201ENST00000383910 135 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 SNORA70J-201ENST00000384182 135 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 AP003170.5-201ENST00000397185 335 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.19□□□□□ -1.42
SCN2BO60939 AL117344.1-201ENST00000407196 616 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 RNA5SP115-201ENST00000411160 107 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 AC009303.1-201ENST00000426307 352 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.19□□□□□ -1.42
SCN2BO60939 KATNBL1P2-201ENST00000433311 835 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.19□□□□□ -1.42
SCN2BO60939 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.19□□□□□ -1.42
SCN2BO60939 RN7SL849P-201ENST00000485236 295 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.19□□□□□ -1.42
SCN2BO60939 SCARNA5-201ENST00000516201 276 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 RN7SKP248-201ENST00000516278 305 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.19□□□□□ -1.42
SCN2BO60939 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.19□□□□□ -1.42
SCN2BO60939 AC023206.1-201ENST00000605824 298 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.19□□□□□ -1.42
SCN2BO60939 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.19□□□□□ -1.42
SCN2BO60939 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SCN2BO60939 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.19□□□□□ -1.42
SCN2BO60939 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.19□□□□□ -1.42
SCN2BO60939 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN2BO60939 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.19□□□□□ -1.42
SCN2BO60939 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCN2BO60939 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCN2BO60939 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms