Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 RNA5SP140-201ENST00000364524 92 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 RNU6-883P-201ENST00000384597 107 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 KIF4CP-201ENST00000422742 1279 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AL590623.1-201ENST00000427864 105 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 MTCO1P57-201ENST00000432182 261 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AL590128.1-201ENST00000433407 286 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 PSMA6P2-201ENST00000457574 686 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 EIF2S2P5-201ENST00000457635 968 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 RN7SL413P-201ENST00000482700 297 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC106822.1-201ENST00000502647 526 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 MAST4-IT1-201ENST00000514241 658 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC011853.1-201ENST00000518911 454 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 SAA3P-201ENST00000533267 365 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC124891.1-201ENST00000536322 519 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 MRPS21P9-201ENST00000571150 257 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC009955.2-201ENST00000597288 542 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AL590032.1-201ENST00000604920 252 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC004908.1-201ENST00000606572 541 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 MIR6861-201ENST00000618657 64 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC006328.2-201ENST00000623198 397 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC012005.2-201ENST00000624333 397 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC087269.2-201ENST00000641764 975 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 ZNF806-201ENST00000438300 1774 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC092821.2-201ENST00000545710 2042 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 CTAGE11P-201ENST00000451540 2353 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC107980.1-201ENST00000558671 3355 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC009237.3-203ENST00000442128 3551 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CCDC187A0A096LP49 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.52□□□□□ -1.36
CCDC187A0A096LP49 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
CCDC187A0A096LP49 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CCDC187A0A096LP49 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.52□□□□□ -1.36
CCDC187A0A096LP49 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CCDC187A0A096LP49 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 SNORD35A-201ENST00000363389 86 ntBASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 RNA5SP474-201ENST00000391234 90 ntBASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 AL050305.1-201ENST00000399993 1230 ntBASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 AL590635.1-201ENST00000406314 586 ntBASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 RN7SKP129-201ENST00000410288 299 ntBASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 MTND2P9-201ENST00000422293 931 ntBASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 CR848007.2-201ENST00000424918 787 ntBASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 AL390879.2-203ENST00000426943 1121 ntBASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 ELOCP6-201ENST00000429066 328 ntBASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC187A0A096LP49 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms