Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 AC074141.1-201ENST00000588129 2995 ntBASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 BIN2P1-201ENST00000504996 1530 ntBASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO3Q9BXY4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC011455.2-201ENST00000599320 3336 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AL031123.3-201ENST00000623345 1837 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 RN7SKP184-201ENST00000362348 333 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AL353133.1-201ENST00000407695 401 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 TMA16P2-201ENST00000413187 601 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 SPATA20P1-201ENST00000423089 438 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 CCNJP1-201ENST00000450600 1149 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AL079303.1-201ENST00000486611 463 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 FTH1P8-201ENST00000498161 514 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 OR4A40P-201ENST00000533878 948 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC127071.2-201ENST00000623293 527 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC018659.2-201ENST00000624690 715 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC006511.3-201ENST00000624929 1783 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 FANCD2P2-201ENST00000437591 1400 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 AC105235.1-201ENST00000623208 1816 ntBASIC5.97□□□□□ -1.45
RSPO3Q9BXY4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 SAGE3P-201ENST00000619800 1635 ntBASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 AL353763.1-201ENST00000624467 1628 ntBASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
RSPO3Q9BXY4 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 FAM32BP-201ENST00000344033 333 ntBASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 RNA5SP429-201ENST00000363688 109 ntBASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 AL034417.1-201ENST00000399343 800 ntBASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 AL929472.1-201ENST00000417484 429 ntBASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 CYP4F30P-202ENST00000420048 405 ntBASIC5.96□□□□□ -1.46
RSPO3Q9BXY4 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms