Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 SCMH1-201ENST00000326197 3275 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 GHR-212ENST00000620156 4529 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 ZNF30-201ENST00000303586 2579 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 AL137784.1-201ENST00000407121 745 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 METTL5-204ENST00000409340 472 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.63□□□□□ -1.03
HLA-CQ95604 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC093019.1-201ENST00000443135 252 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AC239860.1-201ENST00000444680 1270 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC092634.4-203ENST00000451395 448 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 BX322784.1-201ENST00000455793 1077 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC138356.2-201ENST00000521192 667 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.63□□□□□ -1.03
HLA-CQ95604 YWHABP2-201ENST00000540201 713 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.63□□□□□ -1.03
HLA-CQ95604 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 PCMTD1P2-201ENST00000565017 355 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC139085.1-201ENST00000582716 182 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AC008752.3-201ENST00000588113 712 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC8.63□□□□□ -1.03
HLA-CQ95604 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 DUXAP4-201ENST00000603046 613 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 SEPT7P9-203ENST00000604116 343 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AL121985.3-201ENST00000620690 523 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AC016582.3-206ENST00000636547 207 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 LINC00298-201ENST00000426969 2236 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC007938.4-201ENST00000610046 4118 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 CEP95-203ENST00000556440 3139 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 UVRAG-208ENST00000532130 1831 ntTSL 2 BASIC8.63□□□□□ -1.03
HLA-CQ95604 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
HLA-CQ95604 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC8.63□□□□□ -1.03
HLA-CQ95604 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 MTCO1P25-201ENST00000414449 1799 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 AL391261.1-201ENST00000555712 1479 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 CHRNA6-201ENST00000276410 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HLA-CQ95604 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 OR9K2-201ENST00000305377 1122 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 OFCC1-201ENST00000316020 863 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 NFYA-201ENST00000341376 3811 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 MIR138-2-201ENST00000384916 84 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HLA-CQ95604 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 RPL5P35-201ENST00000398869 816 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 CCNG1P1-201ENST00000406783 885 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 AC008155.1-201ENST00000421078 329 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-CQ95604 HMGN1P32-201ENST00000441744 256 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 AC023512.1-201ENST00000444513 499 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-CQ95604 CDC42P2-201ENST00000448566 569 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms