Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
ZNF439Q8NDP4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZNF439Q8NDP4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZNF439Q8NDP4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ZNF439Q8NDP4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZNF439Q8NDP4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 AC095038.1-201ENST00000429248 1591 ntBASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 AC034229.2-201ENST00000566945 2508 ntBASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 MKI67P1-201ENST00000604297 1460 ntBASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 AC022905.1-201ENST00000503430 3048 ntBASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZNF439Q8NDP4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AP002512.4-202ENST00000641599 4530 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 RNA5SP512-201ENST00000364550 120 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 RN7SKP296-201ENST00000411185 341 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AL158214.1-201ENST00000444423 404 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 RPL26P30-201ENST00000453533 435 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 RBMY2EP-202ENST00000456360 940 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 OR52H2P-201ENST00000514607 902 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 IGKV2D-38-201ENST00000518423 240 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 OR5D2P-201ENST00000524390 911 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AC007068.2-201ENST00000543168 395 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AC067852.5-201ENST00000589299 310 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 DIMT1P1-201ENST00000603970 763 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AC004241.2-201ENST00000614562 444 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 API5P1-201ENST00000424316 1510 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 OFD1P17-201ENST00000437639 3018 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZNF439Q8NDP4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AL590635.1-201ENST00000406314 586 ntBASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AL049697.3-201ENST00000406493 982 ntBASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AL139100.1-201ENST00000408001 498 ntBASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AC114940.1-201ENST00000512162 1265 ntBASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 AC096661.1-201ENST00000515870 822 ntBASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 RNA5SP75-201ENST00000516841 111 ntBASIC5.45□□□□□ -1.54
ZNF439Q8NDP4 IGLV3-6-201ENST00000523937 250 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms