Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
VPS8Q8N3P4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
VPS8Q8N3P4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS8Q8N3P4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC10□□□□□ -0.81
VPS8Q8N3P4 RNA5SP110-201ENST00000362638 115 ntBASIC10□□□□□ -0.81
VPS8Q8N3P4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC10□□□□□ -0.81
VPS8Q8N3P4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC10□□□□□ -0.81
VPS8Q8N3P4 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC10□□□□□ -0.81
VPS8Q8N3P4 AP002884.1-201ENST00000479691 655 ntBASIC10□□□□□ -0.81
VPS8Q8N3P4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC10□□□□□ -0.81
VPS8Q8N3P4 AC005363.1-201ENST00000530779 351 ntBASIC10□□□□□ -0.81
VPS8Q8N3P4 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC10□□□□□ -0.81
VPS8Q8N3P4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC10□□□□□ -0.81
VPS8Q8N3P4 AC026826.3-201ENST00000561747 158 ntBASIC10□□□□□ -0.81
VPS8Q8N3P4 AC009120.3-201ENST00000563335 499 ntBASIC10□□□□□ -0.81
VPS8Q8N3P4 AC027229.1-201ENST00000583887 253 ntBASIC10□□□□□ -0.81
VPS8Q8N3P4 AL499605.1-201ENST00000604628 403 ntBASIC10□□□□□ -0.81
VPS8Q8N3P4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC10□□□□□ -0.81
VPS8Q8N3P4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS8Q8N3P4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC10□□□□□ -0.81
VPS8Q8N3P4 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
VPS8Q8N3P4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC10□□□□□ -0.81
VPS8Q8N3P4 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
VPS8Q8N3P4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC10□□□□□ -0.81
VPS8Q8N3P4 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC10□□□□□ -0.81
VPS8Q8N3P4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS8Q8N3P4 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC10□□□□□ -0.81
VPS8Q8N3P4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC010086.1-201ENST00000437359 1052 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 RPSAP40-201ENST00000442343 891 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 RPL12P7-201ENST00000493832 494 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 OR7E99P-201ENST00000505750 922 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC106800.3-201ENST00000511389 308 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 DYNLL1P1-201ENST00000595442 269 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AL109924.4-201ENST00000623089 670 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC017035.1-201ENST00000411999 1115 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC108479.1-201ENST00000431142 427 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 SNX18P26-201ENST00000458433 740 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC073916.1-201ENST00000545095 130 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 MIR3189-201ENST00000578735 73 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS8Q8N3P4 MIR7109-201ENST00000613748 65 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 AC010998.3-201ENST00000613871 631 ntBASIC9.99□□□□□ -0.81
VPS8Q8N3P4 PARP4P1-201ENST00000435945 2337 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 AC008124.1-201ENST00000609803 9730 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 RPL24P2-201ENST00000421023 475 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 PCNPP2-201ENST00000441651 455 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 AC009237.1-201ENST00000442127 744 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 Z83838.1-202ENST00000456225 839 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 RN7SL326P-201ENST00000477493 296 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 RN7SL649P-201ENST00000496974 275 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms