Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 OR51A10P-201ENST00000307165 937 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 OR4N4-201ENST00000328795 1126 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 MIR425-201ENST00000362162 87 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RACK1-201ENST00000376817 965 ntTSL 5 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 MT-TH-201ENST00000387441 69 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RNU2-41P-201ENST00000410991 178 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 MTND4P3-201ENST00000417829 541 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RPL23AP85-201ENST00000421838 433 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 ELOBP4-201ENST00000423418 296 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 DEFB130D-201ENST00000426866 237 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 NPM1P24-201ENST00000428039 894 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 VN1R35P-201ENST00000428102 693 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RPL5P32-201ENST00000454085 879 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC008280.2-201ENST00000455473 307 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RN7SL218P-201ENST00000464637 299 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RN7SL65P-201ENST00000485221 315 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AL135933.1-201ENST00000498657 802 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 SSX8-201ENST00000506270 579 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 NDUFB4P12-201ENST00000513465 390 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 MTCYBP19-201ENST00000517463 1124 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 MPPE1P1-201ENST00000557286 1076 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 BGLT3-201ENST00000564523 994 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RN7SL203P-201ENST00000579600 296 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC044792.1-201ENST00000593294 196 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 MIMT1-201ENST00000597105 1050 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC090181.2-201ENST00000602975 672 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 CLPTM1LP1-201ENST00000604519 484 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC011374.2-201ENST00000607135 526 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC135068.3-201ENST00000623441 1125 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AL132796.3-201ENST00000624703 900 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AL136967.1-201ENST00000625120 441 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC099654.14-201ENST00000638599 341 ntBASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
FOXR1Q6PIV2 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 AC092447.7-201ENST00000422212 1621 ntBASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 AC008498.2-201ENST00000624033 2322 ntBASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 FGF7P2-201ENST00000332473 296 ntBASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC8.22□□□□□ -1.09
FOXR1Q6PIV2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms