Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
UBE3AQ05086 AC007679.3-201ENST00000434035 414 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 GAPDHP59-201ENST00000435908 267 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 HMGN1P2-201ENST00000445197 310 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AL034399.1-201ENST00000451535 380 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 RN7SL39P-201ENST00000462264 297 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AC096743.1-201ENST00000485172 319 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.18□□□□□ -1.26
UBE3AQ05086 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.18□□□□□ -1.26
UBE3AQ05086 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.18□□□□□ -1.26
UBE3AQ05086 RPL3P13-201ENST00000550415 216 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AC026956.1-201ENST00000558741 396 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AC092718.4-201ENST00000566639 716 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.18□□□□□ -1.26
UBE3AQ05086 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.18□□□□□ -1.26
UBE3AQ05086 DYNLL1P1-201ENST00000595442 269 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.18□□□□□ -1.26
UBE3AQ05086 AC245052.7-201ENST00000601161 359 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AC111186.1-201ENST00000604684 130 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AC015982.1-201ENST00000608113 465 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AL359742.1-201ENST00000622497 540 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AC025262.3-201ENST00000623666 360 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.18□□□□□ -1.26
UBE3AQ05086 AL596275.2-203ENST00000641951 371 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
UBE3AQ05086 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
UBE3AQ05086 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
UBE3AQ05086 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
UBE3AQ05086 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
UBE3AQ05086 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
UBE3AQ05086 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
UBE3AQ05086 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.18□□□□□ -1.26
UBE3AQ05086 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.18□□□□□ -1.26
UBE3AQ05086 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
UBE3AQ05086 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
UBE3AQ05086 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.18□□□□□ -1.26
UBE3AQ05086 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.18□□□□□ -1.26
UBE3AQ05086 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
UBE3AQ05086 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.18□□□□□ -1.26
UBE3AQ05086 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
UBE3AQ05086 AL589993.1-201ENST00000407450 2524 ntBASIC7.18□□□□□ -1.26
UBE3AQ05086 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
UBE3AQ05086 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.17□□□□□ -1.26
UBE3AQ05086 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.17□□□□□ -1.26
UBE3AQ05086 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
UBE3AQ05086 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
UBE3AQ05086 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
UBE3AQ05086 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
UBE3AQ05086 RNA5SP435-201ENST00000364044 108 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.17□□□□□ -1.26
UBE3AQ05086 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 U3.52-201ENST00000384034 216 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 YWHAZP6-201ENST00000399764 738 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 ZNF736P10Y-201ENST00000403990 1110 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC7.17□□□□□ -1.26
UBE3AQ05086 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.17□□□□□ -1.26
UBE3AQ05086 KATNBL1P2-201ENST00000433311 835 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 AL020997.1-201ENST00000446554 349 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.17□□□□□ -1.26
UBE3AQ05086 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 OR51A1P-201ENST00000511110 946 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.17□□□□□ -1.26
UBE3AQ05086 OR52H2P-201ENST00000514607 902 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.17□□□□□ -1.26
UBE3AQ05086 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.17□□□□□ -1.26
UBE3AQ05086 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.17□□□□□ -1.26
UBE3AQ05086 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.17□□□□□ -1.26
UBE3AQ05086 AC234775.3-201ENST00000564612 656 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 AC093283.1-201ENST00000565306 1075 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.17□□□□□ -1.26
UBE3AQ05086 AC093635.1-201ENST00000609028 555 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 AC130456.6-201ENST00000623745 765 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 PSMC1P6-201ENST00000477233 1319 ntBASIC7.17□□□□□ -1.26
UBE3AQ05086 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UBE3AQ05086 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
UBE3AQ05086 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms