Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF519P4-201ENST00000514008 125 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 AC011352.2-201ENST00000514574 1016 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 RNA5SP418-201ENST00000515951 117 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 AC016144.1-201ENST00000548175 1087 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 AC106785.4-201ENST00000569492 412 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 RN7SL753P-201ENST00000581238 290 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.55□□□□□ -1.2
CCNA1P78396 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.55□□□□□ -1.2
CCNA1P78396 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.55□□□□□ -1.2
CCNA1P78396 AL034408.1-201ENST00000637712 664 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CCNA1P78396 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.55□□□□□ -1.2
CCNA1P78396 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.55□□□□□ -1.2
CCNA1P78396 AL359396.1-201ENST00000623151 2376 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CCNA1P78396 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CCNA1P78396 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CCNA1P78396 AC132219.2-201ENST00000624416 2327 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CCNA1P78396 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCNA1P78396 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.54□□□□□ -1.2
CCNA1P78396 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCNA1P78396 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.54□□□□□ -1.2
CCNA1P78396 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.54□□□□□ -1.2
CCNA1P78396 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.54□□□□□ -1.2
CCNA1P78396 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCNA1P78396 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCNA1P78396 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.54□□□□□ -1.2
CCNA1P78396 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCNA1P78396 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.54□□□□□ -1.2
CCNA1P78396 DUTP4-201ENST00000424782 475 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 RPSAP65-201ENST00000429660 595 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.54□□□□□ -1.2
CCNA1P78396 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.54□□□□□ -1.2
CCNA1P78396 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.54□□□□□ -1.2
CCNA1P78396 AP002453.1-201ENST00000492327 668 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 SNX18P25-201ENST00000510539 758 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 AL133399.1-201ENST00000527476 298 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 AC008055.1-201ENST00000547032 609 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.54□□□□□ -1.2
CCNA1P78396 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.54□□□□□ -1.2
CCNA1P78396 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.54□□□□□ -1.2
CCNA1P78396 AC005277.2-201ENST00000617898 390 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 MIR6085-201ENST00000618314 110 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.54□□□□□ -1.2
CCNA1P78396 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.54□□□□□ -1.2
CCNA1P78396 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCNA1P78396 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CCNA1P78396 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCNA1P78396 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.54□□□□□ -1.2
CCNA1P78396 AC096992.2-201ENST00000609553 1684 ntBASIC7.54□□□□□ -1.2
CCNA1P78396 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.54□□□□□ -1.2
CCNA1P78396 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCNA1P78396 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.53□□□□□ -1.2
CCNA1P78396 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CCNA1P78396 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.53□□□□□ -1.2
CCNA1P78396 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.53□□□□□ -1.2
CCNA1P78396 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.53□□□□□ -1.2
CCNA1P78396 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 SNORA77.2-201ENST00000408571 112 ntBASIC7.53□□□□□ -1.2
CCNA1P78396 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.53□□□□□ -1.2
CCNA1P78396 RPL6P21-201ENST00000418672 846 ntBASIC7.53□□□□□ -1.2
CCNA1P78396 NAP1L4P2-201ENST00000425958 899 ntBASIC7.53□□□□□ -1.2
CCNA1P78396 AL354707.3-201ENST00000427308 331 ntBASIC7.53□□□□□ -1.2
CCNA1P78396 AC245452.2-201ENST00000435222 392 ntBASIC7.53□□□□□ -1.2
CCNA1P78396 AC242426.1-201ENST00000435270 960 ntBASIC7.53□□□□□ -1.2
CCNA1P78396 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.53□□□□□ -1.2
CCNA1P78396 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.53□□□□□ -1.2
CCNA1P78396 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.53□□□□□ -1.2
CCNA1P78396 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.53□□□□□ -1.2
CCNA1P78396 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.53□□□□□ -1.2
CCNA1P78396 SNORA74.4-201ENST00000607595 199 ntBASIC7.53□□□□□ -1.2
CCNA1P78396 AC008691.1-209ENST00000642094 814 ntBASIC7.53□□□□□ -1.2
CCNA1P78396 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CCNA1P78396 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.53□□□□□ -1.2
CCNA1P78396 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.53□□□□□ -1.2
CCNA1P78396 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.53□□□□□ -1.2
CCNA1P78396 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
CCNA1P78396 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCNA1P78396 AC022613.3-201ENST00000560740 1346 ntBASIC7.52□□□□□ -1.2
CCNA1P78396 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms