Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.91□□□□□ -1.14
RHBDL3P58872 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.91□□□□□ -1.14
RHBDL3P58872 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
RHBDL3P58872 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
RHBDL3P58872 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RHBDL3P58872 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
RHBDL3P58872 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
RHBDL3P58872 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RHBDL3P58872 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
RHBDL3P58872 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.91□□□□□ -1.14
RHBDL3P58872 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.9□□□□□ -1.14
RHBDL3P58872 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.9□□□□□ -1.14
RHBDL3P58872 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
RHBDL3P58872 CUL4AP1-201ENST00000514750 1863 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.9□□□□□ -1.14
RHBDL3P58872 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
RHBDL3P58872 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.9□□□□□ -1.14
RHBDL3P58872 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.9□□□□□ -1.14
RHBDL3P58872 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 RPL34P27-201ENST00000428810 349 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 GAPDHP59-201ENST00000435908 267 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 H3F3AP5-201ENST00000475267 429 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 RPS26P24-201ENST00000497656 331 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.9□□□□□ -1.14
RHBDL3P58872 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.9□□□□□ -1.14
RHBDL3P58872 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.9□□□□□ -1.14
RHBDL3P58872 RN7SKP70-201ENST00000516655 271 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.9□□□□□ -1.14
RHBDL3P58872 AC011270.1-201ENST00000558606 583 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.9□□□□□ -1.14
RHBDL3P58872 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
RHBDL3P58872 MIR3154-201ENST00000577829 84 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 AL122023.1-201ENST00000622847 530 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 CASC19-212ENST00000641153 1287 ntBASIC7.9□□□□□ -1.14
RHBDL3P58872 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RHBDL3P58872 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
RHBDL3P58872 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RHBDL3P58872 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.9□□□□□ -1.15
RHBDL3P58872 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RHBDL3P58872 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
RHBDL3P58872 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.9□□□□□ -1.15
RHBDL3P58872 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.9□□□□□ -1.15
RHBDL3P58872 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
RHBDL3P58872 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 RNA5SP65-201ENST00000363166 119 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 RNA5SP279-201ENST00000365513 117 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC7.89□□□□□ -1.15
RHBDL3P58872 RPL5P20-201ENST00000403848 896 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AL359092.1-201ENST00000417156 265 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 FABP5P1-201ENST00000423401 411 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.89□□□□□ -1.15
RHBDL3P58872 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.89□□□□□ -1.15
RHBDL3P58872 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.89□□□□□ -1.15
RHBDL3P58872 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.89□□□□□ -1.15
RHBDL3P58872 COX4I1P2-201ENST00000447446 547 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.89□□□□□ -1.15
RHBDL3P58872 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.89□□□□□ -1.15
RHBDL3P58872 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 AC008429.2-201ENST00000523057 864 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.89□□□□□ -1.15
RHBDL3P58872 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.89□□□□□ -1.15
RHBDL3P58872 AC026898.1-201ENST00000586404 571 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AC010998.3-201ENST00000613871 631 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AL354718.1-201ENST00000619764 589 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AC073593.1-201ENST00000624500 411 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms