Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 AL662874.1-201ENST00000426065 230 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.79□□□□□ -1.32
BRCA2P51587 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
BRCA2P51587 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 TRIM60P19-201ENST00000452879 1462 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 AL353796.1-201ENST00000561542 3241 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 AL022331.1-201ENST00000429025 477 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 CYCSP22-201ENST00000517555 339 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.79□□□□□ -1.32
BRCA2P51587 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.79□□□□□ -1.32
BRCA2P51587 FAM25E-202ENST00000608562 189 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 OR7A1P-202ENST00000641542 1158 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
BRCA2P51587 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC6.79□□□□□ -1.32
BRCA2P51587 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC6.79□□□□□ -1.32
BRCA2P51587 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
BRCA2P51587 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
BRCA2P51587 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.79□□□□□ -1.32
BRCA2P51587 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.79□□□□□ -1.32
BRCA2P51587 PPIAP10-201ENST00000438675 458 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.79□□□□□ -1.32
BRCA2P51587 AL121579.2-201ENST00000555466 590 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 AP001496.3-201ENST00000580230 913 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 AC025171.4-201ENST00000607250 1047 ntBASIC6.79□□□□□ -1.32
BRCA2P51587 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.79□□□□□ -1.32
BRCA2P51587 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC6.78□□□□□ -1.32
BRCA2P51587 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.78□□□□□ -1.32
BRCA2P51587 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 AC020937.1-201ENST00000519677 1013 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.78□□□□□ -1.32
BRCA2P51587 AP004607.2-201ENST00000533949 322 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.78□□□□□ -1.32
BRCA2P51587 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.78□□□□□ -1.32
BRCA2P51587 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
BRCA2P51587 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
BRCA2P51587 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
BRCA2P51587 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 RGPD5-201ENST00000016946 7253 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 GUCY1B2-204ENST00000531898 1979 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
BRCA2P51587 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 PARP4P2-201ENST00000446672 3326 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 MIR765-201ENST00000390226 114 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.78□□□□□ -1.32
BRCA2P51587 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.78□□□□□ -1.32
BRCA2P51587 RPSAP50-201ENST00000481955 852 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.78□□□□□ -1.32
BRCA2P51587 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.78□□□□□ -1.32
BRCA2P51587 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
BRCA2P51587 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
BRCA2P51587 AL645733.1-201ENST00000402250 217 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 RPL35AP31-201ENST00000418340 337 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 AC245452.2-201ENST00000435222 392 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 Y_RNA.710-201ENST00000516975 110 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 SNORA43.3-201ENST00000517240 103 ntBASIC6.78□□□□□ -1.32
BRCA2P51587 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.78□□□□□ -1.32
BRCA2P51587 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.78□□□□□ -1.32
BRCA2P51587 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
BRCA2P51587 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
BRCA2P51587 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.32
BRCA2P51587 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
BRCA2P51587 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 CYCSP12-201ENST00000437729 300 ntBASIC6.77□□□□□ -1.33
BRCA2P51587 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.77□□□□□ -1.33
BRCA2P51587 SEPT14P12-201ENST00000442280 560 ntBASIC6.77□□□□□ -1.33
BRCA2P51587 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms