Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.97□□□□□ -1.45
SOX2P48431 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.96□□□□□ -1.45
SOX2P48431 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
SOX2P48431 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SOX2P48431 AL669831.5-218ENST00000591702 1873 ntBASIC5.96□□□□□ -1.45
SOX2P48431 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SOX2P48431 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SOX2P48431 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SOX2P48431 AP002370.1-201ENST00000528055 1602 ntBASIC5.96□□□□□ -1.45
SOX2P48431 AC079949.2-201ENST00000617117 2933 ntBASIC5.96□□□□□ -1.45
SOX2P48431 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SOX2P48431 AC022034.1-201ENST00000512867 2156 ntBASIC5.96□□□□□ -1.46
SOX2P48431 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 AC107977.1-201ENST00000355745 939 ntBASIC5.96□□□□□ -1.46
SOX2P48431 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX2P48431 PCNAP3-201ENST00000397222 778 ntBASIC5.96□□□□□ -1.46
SOX2P48431 PTGES3P2-201ENST00000407942 482 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX2P48431 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 AC009963.4-201ENST00000448535 339 ntBASIC5.96□□□□□ -1.46
SOX2P48431 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
SOX2P48431 RPLP0P1-201ENST00000457002 361 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC016489.1-201ENST00000461109 375 ntBASIC5.96□□□□□ -1.46
SOX2P48431 TAAR3P-201ENST00000466706 1078 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC083806.1-201ENST00000468934 316 ntBASIC5.96□□□□□ -1.46
SOX2P48431 RN7SL282P-201ENST00000479676 297 ntBASIC5.96□□□□□ -1.46
SOX2P48431 TAAR3P-202ENST00000481759 1025 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AL591122.1-201ENST00000487348 492 ntBASIC5.96□□□□□ -1.46
SOX2P48431 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX2P48431 AC007537.1-201ENST00000539347 327 ntBASIC5.96□□□□□ -1.46
SOX2P48431 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 HIGD1AP9-201ENST00000550710 279 ntBASIC5.96□□□□□ -1.46
SOX2P48431 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.96□□□□□ -1.46
SOX2P48431 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 MIR3689C-201ENST00000581239 72 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC005776.1-201ENST00000603164 290 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC113361.1-201ENST00000606683 543 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC5.96□□□□□ -1.46
SOX2P48431 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 AC104763.3-201ENST00000613765 618 ntBASIC5.96□□□□□ -1.46
SOX2P48431 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC010333.3-201ENST00000615100 402 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC074276.2-201ENST00000619891 348 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC087072.2-201ENST00000621060 682 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AP001885.1-201ENST00000621658 558 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC025287.2-201ENST00000621911 668 ntBASIC5.96□□□□□ -1.46
SOX2P48431 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SOX2P48431 SNX18P10-201ENST00000625014 519 ntBASIC5.96□□□□□ -1.46
SOX2P48431 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SOX2P48431 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.96□□□□□ -1.46
SOX2P48431 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX2P48431 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SOX2P48431 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX2P48431 AC009135.2-201ENST00000624136 1768 ntBASIC5.95□□□□□ -1.46
SOX2P48431 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SOX2P48431 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX2P48431 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.95□□□□□ -1.46
SOX2P48431 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SOX2P48431 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms