Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SHMT2P34897 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.48□□□□□ -1.37
SHMT2P34897 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SHMT2P34897 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SHMT2P34897 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
SHMT2P34897 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 RN7SKP184-201ENST00000362348 333 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SHMT2P34897 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.48□□□□□ -1.37
SHMT2P34897 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 AL596268.1-201ENST00000427910 1048 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 NPM1P23-201ENST00000440193 849 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 PA2G4P1-201ENST00000442248 1197 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 AL356121.1-201ENST00000442911 156 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 UBBP5-201ENST00000446970 266 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 AC133965.1-201ENST00000452984 354 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 AKR1D1P1-201ENST00000457236 936 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 MTND6P8-201ENST00000503471 522 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.48□□□□□ -1.37
SHMT2P34897 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 OR52H2P-201ENST00000514607 902 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.48□□□□□ -1.37
SHMT2P34897 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 AC024267.2-201ENST00000582737 417 ntBASIC6.48□□□□□ -1.37
SHMT2P34897 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.48□□□□□ -1.37
SHMT2P34897 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.48□□□□□ -1.37
SHMT2P34897 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.48□□□□□ -1.37
SHMT2P34897 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.48□□□□□ -1.37
SHMT2P34897 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SHMT2P34897 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.48□□□□□ -1.37
SHMT2P34897 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHMT2P34897 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.47□□□□□ -1.37
SHMT2P34897 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.47□□□□□ -1.37
SHMT2P34897 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.47□□□□□ -1.37
SHMT2P34897 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.47□□□□□ -1.37
SHMT2P34897 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SHMT2P34897 RNA5SP333-201ENST00000363466 118 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 RNA5SP334-201ENST00000364825 118 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 SNORA7A-201ENST00000384765 139 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 AL049697.3-201ENST00000406493 982 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 RNU4-64P-201ENST00000410795 131 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 RPEP4-201ENST00000437636 602 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.47□□□□□ -1.37
SHMT2P34897 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.47□□□□□ -1.37
SHMT2P34897 RN7SKP64-201ENST00000517206 328 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.47□□□□□ -1.37
SHMT2P34897 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.47□□□□□ -1.37
SHMT2P34897 AC005519.1-201ENST00000554490 601 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.47□□□□□ -1.37
SHMT2P34897 AC106785.4-201ENST00000569492 412 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 RN7SL66P-201ENST00000582099 264 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 AC011921.2-201ENST00000589465 152 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 AC093635.1-201ENST00000609028 555 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 AC211486.4-201ENST00000621495 113 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 AP001885.1-201ENST00000621658 558 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 RAB28P4-201ENST00000622233 665 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 MIR6503-201ENST00000622884 86 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.47□□□□□ -1.37
SHMT2P34897 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.47□□□□□ -1.37
SHMT2P34897 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.47□□□□□ -1.37
SHMT2P34897 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.47□□□□□ -1.37
SHMT2P34897 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.47□□□□□ -1.37
SHMT2P34897 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 PSMC1P4-201ENST00000515236 1327 ntBASIC6.47□□□□□ -1.37
SHMT2P34897 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SHMT2P34897 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHMT2P34897 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.46□□□□□ -1.37
SHMT2P34897 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
SHMT2P34897 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SHMT2P34897 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SHMT2P34897 AC013488.1-201ENST00000526618 1838 ntBASIC6.46□□□□□ -1.37
SHMT2P34897 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms