Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.33□□□□□ -1.08
VARSP26640 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 OR5E1P-201ENST00000305754 927 ntBASIC8.33□□□□□ -1.08
VARSP26640 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
VARSP26640 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.33□□□□□ -1.08
VARSP26640 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
VARSP26640 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.33□□□□□ -1.08
VARSP26640 RPL5P20-201ENST00000403848 896 ntBASIC8.33□□□□□ -1.08
VARSP26640 OR2W4P-201ENST00000406496 926 ntBASIC8.33□□□□□ -1.08
VARSP26640 CCNG1P1-201ENST00000406783 885 ntBASIC8.33□□□□□ -1.08
VARSP26640 FCF1P10-201ENST00000407590 479 ntBASIC8.33□□□□□ -1.08
VARSP26640 MAGEC3-202ENST00000409007 1290 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 AL603650.1-201ENST00000412680 240 ntBASIC8.33□□□□□ -1.08
VARSP26640 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC8.33□□□□□ -1.08
VARSP26640 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.33□□□□□ -1.08
VARSP26640 WRBP1-201ENST00000423352 334 ntBASIC8.33□□□□□ -1.08
VARSP26640 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC8.33□□□□□ -1.08
VARSP26640 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC8.33□□□□□ -1.08
VARSP26640 KRT18P53-201ENST00000431919 117 ntBASIC8.33□□□□□ -1.08
VARSP26640 HSD3BP5-201ENST00000434856 1132 ntBASIC8.33□□□□□ -1.08
VARSP26640 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC8.33□□□□□ -1.08
VARSP26640 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.33□□□□□ -1.08
VARSP26640 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
VARSP26640 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.33□□□□□ -1.08
VARSP26640 UBE2V1P3-201ENST00000439651 417 ntBASIC8.33□□□□□ -1.08
VARSP26640 TRIM60P16-201ENST00000444048 694 ntBASIC8.33□□□□□ -1.08
VARSP26640 ARL5AP2-201ENST00000444698 533 ntBASIC8.33□□□□□ -1.08
VARSP26640 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC8.33□□□□□ -1.08
VARSP26640 PRELID1P3-201ENST00000450055 643 ntBASIC8.33□□□□□ -1.08
VARSP26640 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC8.33□□□□□ -1.08
VARSP26640 MYB-AS1-201ENST00000455534 449 ntTSL 2 BASIC8.33□□□□□ -1.08
VARSP26640 RPL12P8-201ENST00000482081 580 ntBASIC8.33□□□□□ -1.08
VARSP26640 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC8.33□□□□□ -1.08
VARSP26640 KLF7P1-201ENST00000490941 1048 ntBASIC8.33□□□□□ -1.08
VARSP26640 RN7SL280P-201ENST00000496490 288 ntBASIC8.33□□□□□ -1.08
VARSP26640 RACK1-211ENST00000504726 388 ntTSL 5 BASIC8.33□□□□□ -1.08
VARSP26640 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC8.33□□□□□ -1.08
VARSP26640 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.33□□□□□ -1.08
VARSP26640 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC8.33□□□□□ -1.08
VARSP26640 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.33□□□□□ -1.08
VARSP26640 OR7E15P-201ENST00000533484 967 ntBASIC8.33□□□□□ -1.08
VARSP26640 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC8.33□□□□□ -1.08
VARSP26640 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC8.33□□□□□ -1.08
VARSP26640 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC8.33□□□□□ -1.08
VARSP26640 AL352979.3-201ENST00000553515 247 ntBASIC8.33□□□□□ -1.08
VARSP26640 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC8.33□□□□□ -1.08
VARSP26640 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC8.33□□□□□ -1.08
VARSP26640 CYP2C60P-201ENST00000566088 139 ntBASIC8.33□□□□□ -1.08
VARSP26640 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC8.33□□□□□ -1.08
VARSP26640 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.33□□□□□ -1.08
VARSP26640 BNIP3P26-201ENST00000600827 554 ntBASIC8.33□□□□□ -1.08
VARSP26640 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.33□□□□□ -1.08
VARSP26640 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
VARSP26640 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.33□□□□□ -1.08
VARSP26640 AC010338.1-201ENST00000621823 717 ntBASIC8.33□□□□□ -1.08
VARSP26640 KDM5DP1-201ENST00000622542 298 ntBASIC8.33□□□□□ -1.08
VARSP26640 CASC19-205ENST00000641013 1411 ntBASIC8.33□□□□□ -1.08
VARSP26640 OLMALINC-206ENST00000641799 1195 ntBASIC8.33□□□□□ -1.08
VARSP26640 AC099063.3-201ENST00000642066 185 ntBASIC8.33□□□□□ -1.08
VARSP26640 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.33□□□□□ -1.08
VARSP26640 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 ABCA17P-204ENST00000494925 3478 ntBASIC8.33□□□□□ -1.08
VARSP26640 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 TDGF1P3-202ENST00000602699 2710 ntBASIC8.33□□□□□ -1.08
VARSP26640 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
VARSP26640 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 AC008537.3-201ENST00000623128 1881 ntBASIC8.32□□□□□ -1.08
VARSP26640 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 OR9G4-201ENST00000302957 984 ntBASIC8.32□□□□□ -1.08
VARSP26640 RNU4-73P-201ENST00000363164 141 ntBASIC8.32□□□□□ -1.08
VARSP26640 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 GSTA12P-201ENST00000402398 508 ntBASIC8.32□□□□□ -1.08
VARSP26640 NCSTNP1-201ENST00000406229 144 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms