Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
P04436 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
P04436 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 MRPS6P2-201ENST00000381143 370 ntBASIC6.04□□□□□ -1.44
P04436 AC245036.1-201ENST00000391727 309 ntBASIC6.04□□□□□ -1.44
P04436 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.04□□□□□ -1.44
P04436 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.04□□□□□ -1.44
P04436 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.04□□□□□ -1.44
P04436 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.04□□□□□ -1.44
P04436 Z68868.1-201ENST00000429048 544 ntBASIC6.04□□□□□ -1.44
P04436 AC091390.2-201ENST00000432573 374 ntBASIC6.04□□□□□ -1.44
P04436 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.04□□□□□ -1.44
P04436 CCNJP1-201ENST00000450600 1149 ntBASIC6.04□□□□□ -1.44
P04436 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 RPL29P23-201ENST00000486188 442 ntBASIC6.04□□□□□ -1.44
P04436 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
P04436 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.04□□□□□ -1.44
P04436 RPL19P11-201ENST00000495944 589 ntBASIC6.04□□□□□ -1.44
P04436 OR51A1P-201ENST00000511110 946 ntBASIC6.04□□□□□ -1.44
P04436 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.04□□□□□ -1.44
P04436 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
P04436 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.04□□□□□ -1.44
P04436 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.04□□□□□ -1.44
P04436 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.04□□□□□ -1.44
P04436 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.04□□□□□ -1.44
P04436 AL354718.1-201ENST00000619764 589 ntBASIC6.04□□□□□ -1.44
P04436 SNX18P10-201ENST00000625014 519 ntBASIC6.04□□□□□ -1.44
P04436 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.04□□□□□ -1.44
P04436 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.04□□□□□ -1.44
P04436 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.04□□□□□ -1.44
P04436 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.04□□□□□ -1.44
P04436 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.04□□□□□ -1.44
P04436 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
P04436 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
P04436 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.04□□□□□ -1.44
P04436 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.04□□□□□ -1.44
P04436 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.04□□□□□ -1.44
P04436 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P04436 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.04□□□□□ -1.44
P04436 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
P04436 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.04□□□□□ -1.44
P04436 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 AC023245.2-201ENST00000530760 2978 ntBASIC6.03□□□□□ -1.44
P04436 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 ASNSP6-201ENST00000592770 1618 ntBASIC6.03□□□□□ -1.44
P04436 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.03□□□□□ -1.44
P04436 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.03□□□□□ -1.44
P04436 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.03□□□□□ -1.44
P04436 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.03□□□□□ -1.44
P04436 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.03□□□□□ -1.44
P04436 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
P04436 RN7SKP129-201ENST00000410288 299 ntBASIC6.03□□□□□ -1.44
P04436 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.03□□□□□ -1.44
P04436 AL359092.1-201ENST00000417156 265 ntBASIC6.03□□□□□ -1.44
P04436 AL360013.1-201ENST00000419031 858 ntBASIC6.03□□□□□ -1.44
P04436 RPL7AP51-201ENST00000422016 760 ntBASIC6.03□□□□□ -1.44
P04436 AC008753.1-201ENST00000423096 284 ntBASIC6.03□□□□□ -1.44
P04436 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.03□□□□□ -1.44
P04436 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.03□□□□□ -1.44
P04436 GAPDHP16-201ENST00000448152 962 ntBASIC6.03□□□□□ -1.44
P04436 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.03□□□□□ -1.44
P04436 AC098818.1-201ENST00000478593 252 ntBASIC6.03□□□□□ -1.44
P04436 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.03□□□□□ -1.44
P04436 RN7SL649P-201ENST00000496974 275 ntBASIC6.03□□□□□ -1.44
P04436 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.03□□□□□ -1.44
P04436 AP003033.2-201ENST00000528901 805 ntBASIC6.03□□□□□ -1.44
P04436 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.03□□□□□ -1.44
P04436 RPL3P13-201ENST00000550415 216 ntBASIC6.03□□□□□ -1.44
P04436 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.03□□□□□ -1.44
P04436 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.03□□□□□ -1.44
P04436 AC011500.1-201ENST00000601963 469 ntBASIC6.03□□□□□ -1.44
P04436 AC011891.2-201ENST00000604949 397 ntBASIC6.03□□□□□ -1.44
P04436 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.03□□□□□ -1.44
P04436 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
P04436 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 MIR6823-201ENST00000622118 61 ntBASIC6.03□□□□□ -1.44
P04436 AC089999.3-201ENST00000622440 577 ntBASIC6.03□□□□□ -1.44
P04436 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.03□□□□□ -1.44
P04436 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.03□□□□□ -1.44
P04436 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.03□□□□□ -1.44
P04436 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.03□□□□□ -1.44
P04436 OR8A1-204ENST00000642111 1145 ntBASIC6.03□□□□□ -1.44
P04436 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P04436 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms