Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL583832.1-201ENST00000603227 784 ntBASIC8.92□□□□□ -0.98
ALDH1A1P00352 AC087468.1-201ENST00000604365 630 ntBASIC8.92□□□□□ -0.98
ALDH1A1P00352 AC016877.3-201ENST00000606778 504 ntBASIC8.92□□□□□ -0.98
ALDH1A1P00352 AC009994.1-201ENST00000606889 253 ntBASIC8.92□□□□□ -0.98
ALDH1A1P00352 Z98200.1-201ENST00000607298 470 ntBASIC8.92□□□□□ -0.98
ALDH1A1P00352 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC8.92□□□□□ -0.98
ALDH1A1P00352 AP002505.2-201ENST00000623585 696 ntBASIC8.92□□□□□ -0.98
ALDH1A1P00352 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC8.92□□□□□ -0.98
ALDH1A1P00352 CASC19-274ENST00000642018 970 ntBASIC8.92□□□□□ -0.98
ALDH1A1P00352 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
ALDH1A1P00352 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
ALDH1A1P00352 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
ALDH1A1P00352 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
ALDH1A1P00352 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALDH1A1P00352 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
ALDH1A1P00352 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 AL137145.2-201ENST00000399868 3086 ntTSL 2 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 AL031118.1-201ENST00000607727 2955 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 HSPD1P10-201ENST00000404829 1676 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 VDAC2P1-201ENST00000399358 958 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AL031577.2-201ENST00000404133 280 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC007899.1-201ENST00000412776 775 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC231533.2-201ENST00000419045 978 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 MTND1P32-201ENST00000433043 938 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 IGBP1P3-201ENST00000447449 1000 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 YAP1P2-201ENST00000455104 610 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 RN7SL688P-201ENST00000471754 275 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 NIPA2P2-201ENST00000496376 1083 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 BNIP3P41-201ENST00000503774 571 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC004069.2-201ENST00000505438 1114 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 MTND2P33-201ENST00000506452 1031 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC095059.2-201ENST00000510601 933 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 OR5H4P-201ENST00000510851 923 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 RNU6-875P-201ENST00000516488 106 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 NPM1P6-201ENST00000521088 871 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 CENPUP1-201ENST00000526649 1202 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 OR6C7P-201ENST00000547875 934 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC037479.1-201ENST00000558361 625 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC021483.2-201ENST00000567415 758 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 RN7SL426P-201ENST00000579106 295 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 MIMT1-201ENST00000597105 1050 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 AC079880.2-201ENST00000603790 1213 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 AL390058.1-201ENST00000603834 629 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 U4.5-201ENST00000617137 123 ntBASIC8.91□□□□□ -0.98
ALDH1A1P00352 CCL22-201ENST00000219235 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALDH1A1P00352 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
ALDH1A1P00352 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALDH1A1P00352 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALDH1A1P00352 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALDH1A1P00352 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ALDH1A1P00352 ERG-206ENST00000398911 4914 ntTSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALDH1A1P00352 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALDH1A1P00352 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms