Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC245452.2-201ENST00000435222 392 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 RPL23AP28-201ENST00000448062 470 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 RPL7L1P7-201ENST00000509986 724 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 SNX18P23-201ENST00000510867 677 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 IGHV3-57-201ENST00000520143 280 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC091932.1-201ENST00000569381 427 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC107993.1-201ENST00000591343 684 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 ACTG1P22-201ENST00000603793 1099 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AL353807.4-201ENST00000604995 257 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC245407.2-201ENST00000614199 451 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC005393.1-201ENST00000617916 584 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC103564.3-201ENST00000621194 220 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC005355.2-201ENST00000625064 484 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC140479.4-205ENST00000636339 820 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC243725.1-201ENST00000637164 436 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC007012.2-201ENST00000623206 1676 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AL663061.1-201ENST00000416625 580 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 GAPDHP57-201ENST00000424400 585 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 PAICSP2-201ENST00000429118 1150 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 LDHAP2-201ENST00000437325 985 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AL451063.1-201ENST00000450164 1133 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 SCDP1-201ENST00000455244 1081 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SL492P-201ENST00000460700 295 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SL390P-201ENST00000470634 284 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC090589.1-201ENST00000473109 362 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SL654P-201ENST00000479178 292 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 RPS10P28-201ENST00000480396 498 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 H3F3AP3-201ENST00000497682 407 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 FTH1P8-201ENST00000498161 514 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC140063.1-201ENST00000541343 259 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC126323.4-201ENST00000566935 234 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AC009283.1-201ENST00000615852 645 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 AP001885.1-201ENST00000621658 558 ntBASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDD3Q9Y3P4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms