Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC007842.1-201ENST00000597336 2039 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 RN7SKP77-201ENST00000363261 353 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 GABARAPL3-201ENST00000412799 354 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC012075.1-201ENST00000436549 580 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 ELOCP3-201ENST00000439303 348 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC183089.2-201ENST00000637931 916 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC092725.2-201ENST00000567658 1389 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AL590240.2-201ENST00000413370 894 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 SETP3-201ENST00000581726 813 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 U3.7-201ENST00000363668 216 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 RN7SL870P-201ENST00000460111 296 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AC024558.1-201ENST00000505008 528 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 RN7SL544P-201ENST00000617232 284 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 RN7SL763P-201ENST00000620922 284 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 OR7A1P-202ENST00000641542 1158 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AL139384.2-201ENST00000613809 3590 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AL049634.1-201ENST00000453770 1720 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AC020658.2-201ENST00000559030 4020 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AL645927.1-201ENST00000396783 406 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AL139148.1-201ENST00000427122 680 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 CFL1P1-202ENST00000432948 411 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AC245047.5-201ENST00000437312 556 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 SPRYD7P1-201ENST00000443861 570 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 FTLP8-201ENST00000446770 267 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 Y_RNA.710-201ENST00000516975 110 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 MIR6085-201ENST00000618314 110 ntBASIC6.53□□□□□ -1.36
CHD7Q9P2D1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CHD7Q9P2D1 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.36
CHD7Q9P2D1 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CHD7Q9P2D1 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CHD7Q9P2D1 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms