Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 Z99496.1-201ENST00000469424 1477 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 OR7E122P-202ENST00000641144 6171 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 DDIAS-207ENST00000528759 3278 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AC006026.1-201ENST00000444025 1803 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 WDR93-205ENST00000560294 2293 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
HLA-CQ95604 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 SNORA4.1-201ENST00000364263 144 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 Y_RNA.311-201ENST00000365068 96 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 CDC42P6-201ENST00000421246 576 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 RPS7P12-201ENST00000422385 582 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 MTND4LP10-201ENST00000435146 291 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 PSMD8P1-201ENST00000436275 769 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AC073614.1-201ENST00000438690 650 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 ARMC8P1-201ENST00000443069 1289 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC8.64□□□□□ -1.03
HLA-CQ95604 ARL5AP2-201ENST00000444698 533 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 SNRPFP4-201ENST00000456366 242 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 TREML3P-201ENST00000457327 501 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 ANK3-207ENST00000460468 677 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 PSAT1P4-201ENST00000466500 526 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 RPL34P22-201ENST00000468193 318 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 RPL23AP37-201ENST00000479658 549 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 RPS10P28-201ENST00000480396 498 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 RPL7P42-201ENST00000481005 679 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AC109462.1-201ENST00000491087 368 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 RN7SL864P-201ENST00000493457 285 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AC084871.2-201ENST00000503355 464 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 PDLIM1P4-201ENST00000504327 1006 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AC107385.1-201ENST00000507985 778 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 IGHVIII-82-201ENST00000522058 250 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
HLA-CQ95604 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 ARGFXP2-201ENST00000579304 949 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 MTCO2P22-201ENST00000603246 681 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 BNIP3P11-201ENST00000603878 563 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 MIR7162-201ENST00000611134 69 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC8.64□□□□□ -1.03
HLA-CQ95604 AL162377.2-201ENST00000624532 337 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 AP000977.1-201ENST00000501964 2908 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 SPO11-202ENST00000371260 1608 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 MARK2P4-201ENST00000503381 2380 ntBASIC8.64□□□□□ -1.03
HLA-CQ95604 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 LRRC4C-207ENST00000619527 2286 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.64□□□□□ -1.03
HLA-CQ95604 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.64□□□□□ -1.03
HLA-CQ95604 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 MARK2P10-201ENST00000454959 1437 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
HLA-CQ95604 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-CQ95604 GLULP5-201ENST00000547831 1390 ntBASIC8.63□□□□□ -1.03
HLA-CQ95604 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms