Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 USP40-202ENST00000409945 1946 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AC138915.4-201ENST00000565549 4147 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AC105114.1-201ENST00000624795 1862 ntBASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 SFTPD-AS1-201ENST00000608229 5001 ntBASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 RANP2-201ENST00000456833 229 ntBASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 PPIAP19-201ENST00000486414 492 ntBASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 NPM1P45-201ENST00000583151 559 ntBASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 RNA5SP242-201ENST00000364171 118 ntBASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 MIR541-201ENST00000401360 84 ntBASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 HMGN1P36-201ENST00000446623 298 ntBASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AC022467.1-201ENST00000614738 749 ntBASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42BPAQ5VT25 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 AC022325.1-201ENST00000502748 2199 ntBASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 SUMO2P10-201ENST00000452006 288 ntBASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 GEMIN2P1-201ENST00000454246 752 ntBASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 IGKV1D-22-201ENST00000518953 324 ntBASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 AC024651.2-201ENST00000562480 2098 ntBASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42BPAQ5VT25 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 OR2A1-AS1-202ENST00000467944 422 ntBASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AC021269.1-201ENST00000526860 705 ntBASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AP003396.4-201ENST00000527574 265 ntBASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AC119501.1-201ENST00000603646 475 ntBASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AC096708.4-201ENST00000620563 552 ntBASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AC062022.1-201ENST00000451026 1684 ntBASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AF287957.1-201ENST00000607368 1595 ntBASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 PSG10P-201ENST00000501199 1500 ntBASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CDC42BPAQ5VT25 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms