Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 AC104260.1-201ENST00000616660 539 ntBASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 AL157359.3-201ENST00000623771 217 ntBASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 AC068044.1-201ENST00000441585 1978 ntBASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 AC010533.1-201ENST00000624875 2105 ntBASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 SOCS5P4-201ENST00000454743 1566 ntBASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RSPO4Q2I0M5 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AP001528.3-201ENST00000624364 3249 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 GLDCP1-201ENST00000510885 2678 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AP000542.3-201ENST00000623391 6114 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 FAM205BP-202ENST00000399773 4009 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC008033.1-201ENST00000216407 1162 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RNU6-468P-201ENST00000384003 109 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RNU6-1119P-201ENST00000384349 108 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 DEFB108C-201ENST00000400154 252 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AL033519.1-201ENST00000407266 307 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 SNORA79B-201ENST00000410557 148 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC012498.1-201ENST00000424037 437 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 FO393414.1-201ENST00000428697 1184 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RPS7P2-201ENST00000435134 607 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RPL22P17-201ENST00000438729 315 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 MRPS21P1-201ENST00000453850 223 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 MED28P8-201ENST00000454831 521 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 MTND1P11-201ENST00000456661 876 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 OR7E62P-201ENST00000456741 477 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 CABYRP1-201ENST00000465493 1045 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RPL21P18-201ENST00000469899 480 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RN7SL688P-201ENST00000471754 275 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RN7SL861P-201ENST00000473793 285 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC079140.3-201ENST00000511111 550 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 CR383658.1-201ENST00000514609 734 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RN7SKP34-201ENST00000516142 244 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC100823.2-201ENST00000518337 699 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AP001646.2-201ENST00000528645 1156 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC087257.2-201ENST00000538759 928 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC079363.1-201ENST00000551366 1125 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AL442663.2-201ENST00000554385 511 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC022146.1-201ENST00000595307 847 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC048344.3-201ENST00000605512 251 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RN7SL778P-201ENST00000607160 297 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC117490.2-201ENST00000610042 594 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC245407.2-201ENST00000614199 451 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC009509.4-201ENST00000619202 509 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 FP325313.1-201ENST00000638228 703 ntBASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms