Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.3□□□□□ -1.24
TPM4P67936 SNX18P9-201ENST00000440580 835 ntBASIC7.3□□□□□ -1.24
TPM4P67936 RN7SL492P-201ENST00000460700 295 ntBASIC7.3□□□□□ -1.24
TPM4P67936 AL135933.1-201ENST00000498657 802 ntBASIC7.3□□□□□ -1.24
TPM4P67936 AC091849.1-201ENST00000509920 121 ntBASIC7.3□□□□□ -1.24
TPM4P67936 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM4P67936 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.3□□□□□ -1.24
TPM4P67936 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.3□□□□□ -1.24
TPM4P67936 AC021820.1-201ENST00000525564 808 ntBASIC7.3□□□□□ -1.24
TPM4P67936 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM4P67936 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM4P67936 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.3□□□□□ -1.24
TPM4P67936 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
TPM4P67936 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM4P67936 AC073857.1-201ENST00000625082 1054 ntBASIC7.3□□□□□ -1.24
TPM4P67936 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM4P67936 AC074141.1-201ENST00000588129 2995 ntBASIC7.3□□□□□ -1.24
TPM4P67936 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM4P67936 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM4P67936 AC092646.2-201ENST00000431242 2095 ntBASIC7.29□□□□□ -1.24
TPM4P67936 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
TPM4P67936 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
TPM4P67936 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM4P67936 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
TPM4P67936 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM4P67936 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM4P67936 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM4P67936 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM4P67936 NIP7P1-201ENST00000433227 512 ntBASIC7.29□□□□□ -1.24
TPM4P67936 AC003989.1-201ENST00000434569 565 ntBASIC7.29□□□□□ -1.24
TPM4P67936 RPL22P11-201ENST00000434894 385 ntBASIC7.29□□□□□ -1.24
TPM4P67936 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM4P67936 LDHAP2-201ENST00000437325 985 ntBASIC7.29□□□□□ -1.24
TPM4P67936 RPS13P2-201ENST00000437890 455 ntBASIC7.29□□□□□ -1.24
TPM4P67936 BX005266.3-201ENST00000443013 1075 ntBASIC7.29□□□□□ -1.24
TPM4P67936 OR13K1P-201ENST00000444577 975 ntBASIC7.29□□□□□ -1.24
TPM4P67936 PFN1P11-201ENST00000445829 389 ntBASIC7.29□□□□□ -1.24
TPM4P67936 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM4P67936 RN7SL145P-201ENST00000469955 296 ntBASIC7.29□□□□□ -1.24
TPM4P67936 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM4P67936 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM4P67936 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM4P67936 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM4P67936 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM4P67936 AL031658.2-201ENST00000616850 651 ntBASIC7.29□□□□□ -1.24
TPM4P67936 AP001264.1-201ENST00000620602 703 ntBASIC7.29□□□□□ -1.24
TPM4P67936 AC013489.3-201ENST00000623274 517 ntBASIC7.29□□□□□ -1.24
TPM4P67936 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM4P67936 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM4P67936 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM4P67936 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
TPM4P67936 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM4P67936 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM4P67936 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM4P67936 AC020656.2-201ENST00000613291 5309 ntBASIC7.29□□□□□ -1.24
TPM4P67936 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM4P67936 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM4P67936 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM4P67936 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM4P67936 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
TPM4P67936 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM4P67936 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
TPM4P67936 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
TPM4P67936 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM4P67936 SHQ1P1-201ENST00000437111 1544 ntBASIC7.28□□□□□ -1.24
TPM4P67936 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
TPM4P67936 SNORA38B-201ENST00000363524 131 ntBASIC7.28□□□□□ -1.24
TPM4P67936 RPS10P21-201ENST00000430654 475 ntBASIC7.28□□□□□ -1.24
TPM4P67936 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM4P67936 AC007790.1-201ENST00000439081 782 ntBASIC7.28□□□□□ -1.24
TPM4P67936 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM4P67936 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.28□□□□□ -1.24
TPM4P67936 SNRPBP1-201ENST00000443634 282 ntBASIC7.28□□□□□ -1.24
TPM4P67936 SRP68P2-201ENST00000456184 254 ntBASIC7.28□□□□□ -1.24
TPM4P67936 RN7SL849P-201ENST00000485236 295 ntBASIC7.28□□□□□ -1.24
TPM4P67936 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.28□□□□□ -1.24
TPM4P67936 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.28□□□□□ -1.24
TPM4P67936 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM4P67936 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM4P67936 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM4P67936 PPIAP6-201ENST00000557078 499 ntBASIC7.28□□□□□ -1.24
TPM4P67936 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM4P67936 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM4P67936 MIR5705-201ENST00000579870 89 ntBASIC7.28□□□□□ -1.24
TPM4P67936 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM4P67936 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM4P67936 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM4P67936 FRG2MP-201ENST00000613317 856 ntBASIC7.28□□□□□ -1.24
TPM4P67936 MRPL57P1-201ENST00000621486 265 ntBASIC7.28□□□□□ -1.24
TPM4P67936 FKBP1AP4-201ENST00000631775 336 ntBASIC7.28□□□□□ -1.24
TPM4P67936 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM4P67936 AP001153.1-201ENST00000641024 338 ntBASIC7.28□□□□□ -1.24
TPM4P67936 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM4P67936 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM4P67936 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM4P67936 AC011815.2-201ENST00000618230 2021 ntBASIC7.28□□□□□ -1.24
TPM4P67936 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM4P67936 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM4P67936 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
TPM4P67936 NEK2P2-201ENST00000438441 1338 ntBASIC7.27□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms