Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 RPL11P4-201ENST00000332269 436 ntBASIC5.42□□□□□ -1.54
LMO4P61968 RBBP4P5-201ENST00000398583 1266 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AL391419.1-201ENST00000398901 1275 ntBASIC5.42□□□□□ -1.54
LMO4P61968 YWHAZP6-201ENST00000399764 738 ntBASIC5.42□□□□□ -1.54
LMO4P61968 RPL21P50-201ENST00000417698 477 ntBASIC5.42□□□□□ -1.54
LMO4P61968 VDAC1P2-201ENST00000423609 850 ntBASIC5.42□□□□□ -1.54
LMO4P61968 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.42□□□□□ -1.54
LMO4P61968 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.42□□□□□ -1.54
LMO4P61968 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 POU5F1P5-201ENST00000445059 658 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AL390728.3-201ENST00000452704 270 ntBASIC5.42□□□□□ -1.54
LMO4P61968 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.42□□□□□ -1.54
LMO4P61968 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 AC095057.1-201ENST00000507583 168 ntBASIC5.42□□□□□ -1.54
LMO4P61968 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 RNA5SP441-201ENST00000516809 88 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AC026616.1-201ENST00000523157 525 ntBASIC5.42□□□□□ -1.54
LMO4P61968 CYCSP25-201ENST00000525280 316 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AC084121.1-201ENST00000533882 835 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AC023968.1-201ENST00000560719 475 ntBASIC5.42□□□□□ -1.54
LMO4P61968 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 AL589863.1-201ENST00000595383 631 ntBASIC5.42□□□□□ -1.54
LMO4P61968 SMIM12P1-201ENST00000603004 274 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AL356986.1-201ENST00000604085 341 ntBASIC5.42□□□□□ -1.54
LMO4P61968 SNORD91A-202ENST00000609620 191 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AL135999.3-201ENST00000610501 812 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AC097641.3-201ENST00000613523 464 ntBASIC5.42□□□□□ -1.54
LMO4P61968 MIR6085-201ENST00000618314 110 ntBASIC5.42□□□□□ -1.54
LMO4P61968 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 LINC02495-203ENST00000636704 242 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
LMO4P61968 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LMO4P61968 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.42□□□□□ -1.54
LMO4P61968 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 AC119674.1-204ENST00000641348 1343 ntBASIC5.42□□□□□ -1.54
LMO4P61968 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 RPL31P11-201ENST00000426558 1558 ntBASIC5.42□□□□□ -1.54
LMO4P61968 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
LMO4P61968 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 AC023245.2-201ENST00000530760 2978 ntBASIC5.41□□□□□ -1.54
LMO4P61968 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.41□□□□□ -1.54
LMO4P61968 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 AC011379.1-201ENST00000508713 3025 ntBASIC5.41□□□□□ -1.54
LMO4P61968 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.41□□□□□ -1.54
LMO4P61968 MIR188-201ENST00000385034 86 ntBASIC5.41□□□□□ -1.54
LMO4P61968 MIR541-201ENST00000401360 84 ntBASIC5.41□□□□□ -1.54
LMO4P61968 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LMO4P61968 SNORA11.3-201ENST00000408471 128 ntBASIC5.41□□□□□ -1.54
LMO4P61968 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.41□□□□□ -1.54
LMO4P61968 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.41□□□□□ -1.54
LMO4P61968 RPL5P10-201ENST00000445207 894 ntBASIC5.41□□□□□ -1.54
LMO4P61968 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.41□□□□□ -1.54
LMO4P61968 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC5.41□□□□□ -1.54
LMO4P61968 RPL23AP68-201ENST00000480924 445 ntBASIC5.41□□□□□ -1.54
LMO4P61968 RN7SL561P-201ENST00000488553 281 ntBASIC5.41□□□□□ -1.54
LMO4P61968 GM2AP2-201ENST00000491764 562 ntBASIC5.41□□□□□ -1.54
LMO4P61968 PFN1P8-201ENST00000497012 543 ntBASIC5.41□□□□□ -1.54
LMO4P61968 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.41□□□□□ -1.54
LMO4P61968 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.41□□□□□ -1.54
LMO4P61968 AC111000.5-201ENST00000506559 1178 ntBASIC5.41□□□□□ -1.54
LMO4P61968 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.41□□□□□ -1.54
LMO4P61968 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC5.41□□□□□ -1.54
LMO4P61968 HSD3BP3-201ENST00000514706 994 ntBASIC5.41□□□□□ -1.54
LMO4P61968 RNA5SP418-201ENST00000515951 117 ntBASIC5.41□□□□□ -1.54
LMO4P61968 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.41□□□□□ -1.54
LMO4P61968 AC008055.1-201ENST00000547032 609 ntBASIC5.41□□□□□ -1.54
LMO4P61968 AL845552.1-201ENST00000556820 323 ntBASIC5.41□□□□□ -1.54
LMO4P61968 AC005632.2-201ENST00000564271 828 ntBASIC5.41□□□□□ -1.54
LMO4P61968 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.41□□□□□ -1.54
LMO4P61968 SNORA11.6-201ENST00000619030 128 ntBASIC5.41□□□□□ -1.54
LMO4P61968 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.41□□□□□ -1.54
LMO4P61968 AL162377.2-201ENST00000624532 337 ntBASIC5.41□□□□□ -1.54
LMO4P61968 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
LMO4P61968 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms