Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL139123.1-201ENST00000612008 430 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AL512427.1-201ENST00000618593 349 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AC068234.2-201ENST00000619646 522 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.35□□□□□ -1.39
CLRN1P58418 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.35□□□□□ -1.39
CLRN1P58418 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CLRN1P58418 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 AC079178.2-201ENST00000439323 1624 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.35□□□□□ -1.39
CLRN1P58418 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 AC017002.4-201ENST00000604721 1525 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CLRN1P58418 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.34□□□□□ -1.39
CLRN1P58418 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 AC034111.1-201ENST00000562143 3770 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CLRN1P58418 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 MIR365B-201ENST00000362317 111 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 RNY3P9-201ENST00000384727 106 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 NHP2P2-201ENST00000396362 460 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 RN7SKP232-201ENST00000410170 290 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 HIGD1AP15-201ENST00000416198 280 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 XKRYP1-201ENST00000423438 492 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 XKRYP2-201ENST00000432915 492 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 AL354983.1-201ENST00000434580 906 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 ST13P2-201ENST00000438916 1109 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 RPL7P33-201ENST00000444159 742 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 CYCSP44-201ENST00000448560 313 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.34□□□□□ -1.39
CLRN1P58418 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 RN7SL325P-201ENST00000460434 283 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 AC018475.1-201ENST00000478358 465 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 PABPC1P1-201ENST00000506347 591 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC091515.1-201ENST00000548110 679 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.34□□□□□ -1.39
CLRN1P58418 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.34□□□□□ -1.39
CLRN1P58418 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC023825.1-201ENST00000566704 1030 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 EEF1B2P1-201ENST00000567221 672 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC006116.6-201ENST00000593258 1103 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC022022.2-201ENST00000602989 360 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 AC015849.2-201ENST00000605738 409 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.34□□□□□ -1.39
CLRN1P58418 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CLRN1P58418 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 AL355493.4-201ENST00000618530 292 ntBASIC6.34□□□□□ -1.39
CLRN1P58418 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CLRN1P58418 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.34□□□□□ -1.39
CLRN1P58418 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLRN1P58418 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
CLRN1P58418 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CLRN1P58418 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CLRN1P58418 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CLRN1P58418 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CLRN1P58418 AL359922.2-201ENST00000581788 3017 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 CTAGE11P-201ENST00000451540 2353 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.33□□□□□ -1.4
CLRN1P58418 AC132219.2-201ENST00000624416 2327 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 AC015871.3-201ENST00000618835 2261 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 AL929601.4-201ENST00000613011 1341 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.33□□□□□ -1.4
CLRN1P58418 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CLRN1P58418 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms