Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FAM32BP-201ENST00000344033 333 ntBASIC6.83□□□□□ -1.32
CDH6P55285 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.83□□□□□ -1.32
CDH6P55285 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.83□□□□□ -1.32
CDH6P55285 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.83□□□□□ -1.32
CDH6P55285 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.83□□□□□ -1.32
CDH6P55285 AL929472.1-201ENST00000417484 429 ntBASIC6.83□□□□□ -1.32
CDH6P55285 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.83□□□□□ -1.32
CDH6P55285 GAPDHP33-201ENST00000443168 1013 ntBASIC6.83□□□□□ -1.32
CDH6P55285 AC022080.2-201ENST00000452932 533 ntBASIC6.83□□□□□ -1.32
CDH6P55285 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.83□□□□□ -1.32
CDH6P55285 RN7SKP198-201ENST00000459286 306 ntBASIC6.83□□□□□ -1.32
CDH6P55285 AC115223.1-201ENST00000466377 870 ntBASIC6.83□□□□□ -1.32
CDH6P55285 AC092824.1-201ENST00000483524 576 ntBASIC6.83□□□□□ -1.32
CDH6P55285 RN7SL37P-201ENST00000490461 307 ntBASIC6.83□□□□□ -1.32
CDH6P55285 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH6P55285 AC008429.2-201ENST00000523057 864 ntBASIC6.83□□□□□ -1.32
CDH6P55285 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.83□□□□□ -1.32
CDH6P55285 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.83□□□□□ -1.32
CDH6P55285 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH6P55285 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.83□□□□□ -1.32
CDH6P55285 RN7SL32P-201ENST00000580514 281 ntBASIC6.83□□□□□ -1.32
CDH6P55285 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CDH6P55285 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH6P55285 AC073488.9-201ENST00000631601 754 ntBASIC6.83□□□□□ -1.32
CDH6P55285 AL391261.1-201ENST00000555712 1479 ntBASIC6.83□□□□□ -1.32
CDH6P55285 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH6P55285 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.82□□□□□ -1.32
CDH6P55285 AC010132.4-201ENST00000569883 1368 ntBASIC6.82□□□□□ -1.32
CDH6P55285 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CDH6P55285 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.82□□□□□ -1.32
CDH6P55285 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 AC087392.3-202ENST00000358446 1754 ntBASIC6.82□□□□□ -1.32
CDH6P55285 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.82□□□□□ -1.32
CDH6P55285 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 AC078880.4-201ENST00000617627 1749 ntBASIC6.82□□□□□ -1.32
CDH6P55285 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.82□□□□□ -1.32
CDH6P55285 BRD7P6-201ENST00000431406 1860 ntBASIC6.82□□□□□ -1.32
CDH6P55285 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.82□□□□□ -1.32
CDH6P55285 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.82□□□□□ -1.32
CDH6P55285 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CDH6P55285 AL023284.3-201ENST00000407767 334 ntBASIC6.82□□□□□ -1.32
CDH6P55285 RPS21P8-201ENST00000413365 247 ntBASIC6.82□□□□□ -1.32
CDH6P55285 PTPN2P1-201ENST00000423212 1072 ntBASIC6.82□□□□□ -1.32
CDH6P55285 E2F6P1-201ENST00000428850 745 ntBASIC6.82□□□□□ -1.32
CDH6P55285 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.82□□□□□ -1.32
CDH6P55285 AC083855.1-201ENST00000440041 258 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.82□□□□□ -1.32
CDH6P55285 E2F6P3-201ENST00000441743 743 ntBASIC6.82□□□□□ -1.32
CDH6P55285 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.82□□□□□ -1.32
CDH6P55285 AC236972.4-201ENST00000458091 963 ntBASIC6.82□□□□□ -1.32
CDH6P55285 RN7SL70P-201ENST00000478322 302 ntBASIC6.82□□□□□ -1.32
CDH6P55285 RN7SL350P-201ENST00000492591 299 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AC122714.1-201ENST00000502510 459 ntBASIC6.82□□□□□ -1.32
CDH6P55285 NPM1P27-201ENST00000502784 830 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AC093325.1-201ENST00000508378 326 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.82□□□□□ -1.32
CDH6P55285 RN7SKP196-201ENST00000516267 345 ntBASIC6.82□□□□□ -1.32
CDH6P55285 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.82□□□□□ -1.32
CDH6P55285 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.82□□□□□ -1.32
CDH6P55285 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.82□□□□□ -1.32
CDH6P55285 CCDC58P1-201ENST00000578567 430 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AC245052.7-201ENST00000601161 359 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AL591222.2-201ENST00000604443 754 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.82□□□□□ -1.32
CDH6P55285 AC093635.1-201ENST00000609028 555 ntBASIC6.82□□□□□ -1.32
CDH6P55285 MIR7854-201ENST00000620068 65 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AP001264.1-201ENST00000620602 703 ntBASIC6.82□□□□□ -1.32
CDH6P55285 MRPL57P1-201ENST00000621486 265 ntBASIC6.82□□□□□ -1.32
CDH6P55285 AC005514.1-201ENST00000623521 208 ntBASIC6.82□□□□□ -1.32
CDH6P55285 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 AL121936.2-201ENST00000641935 662 ntBASIC6.82□□□□□ -1.32
CDH6P55285 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
CDH6P55285 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDH6P55285 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.82□□□□□ -1.32
CDH6P55285 AC010624.4-201ENST00000597606 1351 ntBASIC6.82□□□□□ -1.32
CDH6P55285 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CDH6P55285 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.81□□□□□ -1.32
CDH6P55285 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.81□□□□□ -1.32
CDH6P55285 CCDC150P1-201ENST00000537123 2215 ntBASIC6.81□□□□□ -1.32
CDH6P55285 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms