Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.07□□□□□ -1.44
SPTA1P02549 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SPTA1P02549 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.07□□□□□ -1.44
SPTA1P02549 AL590128.1-201ENST00000433407 286 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.07□□□□□ -1.44
SPTA1P02549 AL163193.1-201ENST00000444895 788 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.07□□□□□ -1.44
SPTA1P02549 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 AC146944.3-201ENST00000509969 371 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.07□□□□□ -1.44
SPTA1P02549 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.07□□□□□ -1.44
SPTA1P02549 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.07□□□□□ -1.44
SPTA1P02549 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.07□□□□□ -1.44
SPTA1P02549 AC020914.7-201ENST00000594477 545 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 AC097467.4-201ENST00000605504 141 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.07□□□□□ -1.44
SPTA1P02549 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SPTA1P02549 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SPTA1P02549 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.07□□□□□ -1.44
SPTA1P02549 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SPTA1P02549 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
SPTA1P02549 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SPTA1P02549 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 TVP23CP1-201ENST00000450317 639 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 HMGB1P7-201ENST00000450921 612 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.06□□□□□ -1.44
SPTA1P02549 LSM3P4-201ENST00000502948 309 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 TMEM97P2-201ENST00000517841 403 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 AL445383.1-201ENST00000554689 874 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 MIR3691-201ENST00000578066 90 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AC008507.3-201ENST00000585753 472 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 AC009237.12-201ENST00000604755 742 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AP001437.1-201ENST00000608783 456 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.06□□□□□ -1.44
SPTA1P02549 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.06□□□□□ -1.44
SPTA1P02549 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
SPTA1P02549 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 SNORA11-201ENST00000408789 128 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.06□□□□□ -1.44
SPTA1P02549 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 SNX18P24-201ENST00000505249 671 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 SNX18P23-201ENST00000510867 677 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 OR10G5P-201ENST00000532733 358 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.06□□□□□ -1.44
SPTA1P02549 RN7SL404P-201ENST00000582421 281 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.06□□□□□ -1.44
SPTA1P02549 AL049767.1-202ENST00000637826 242 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AC023245.2-201ENST00000530760 2978 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 AL021877.2-201ENST00000624442 10684 ntBASIC6.06□□□□□ -1.44
SPTA1P02549 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.06□□□□□ -1.44
SPTA1P02549 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPTA1P02549 VN2R1P-201ENST00000449668 1743 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms