Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 NCOA4P3-201ENST00000513203 1877 ntBASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 RN7SKP237-201ENST00000364663 301 ntBASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 RPL21P50-201ENST00000417698 477 ntBASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 AL512652.1-201ENST00000619006 500 ntBASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 SNX18P12-201ENST00000624821 759 ntBASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 AL357140.4-201ENST00000636827 412 ntBASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CDK5RAP2Q96SN8 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AC125238.2-201ENST00000430003 1440 ntBASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 RN7SKP15-201ENST00000364742 309 ntBASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AL023284.3-201ENST00000407767 334 ntBASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AC009120.3-201ENST00000563335 499 ntBASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AC027229.1-201ENST00000583887 253 ntBASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AC139493.1-201ENST00000604368 397 ntBASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AC005393.1-201ENST00000617916 584 ntBASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 AC073862.4-201ENST00000622982 854 ntBASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP2Q96SN8 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
CDK5RAP2Q96SN8 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CDK5RAP2Q96SN8 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.2
CDK5RAP2Q96SN8 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 RNA5SP273-201ENST00000362484 113 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 RPS10P18-201ENST00000442662 495 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 RN7SL643P-201ENST00000471845 291 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 MIR3189-201ENST00000578735 73 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AC005332.4-201ENST00000592752 579 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AL359922.2-201ENST00000581788 3017 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AC110597.1-201ENST00000562669 3176 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AC110716.2-201ENST00000563865 3945 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 RNU1-24P-201ENST00000364285 165 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 RNA5SP500-201ENST00000364486 119 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AC003989.1-201ENST00000434569 565 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AL136981.1-203ENST00000451452 3844 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 RN7SL254P-201ENST00000460609 284 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 LINC00556-201ENST00000569603 412 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AC124916.2-201ENST00000604416 224 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 AC073046.2-201ENST00000604756 527 ntBASIC7.58□□□□□ -1.2
CDK5RAP2Q96SN8 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.57□□□□□ -1.2
CDK5RAP2Q96SN8 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP2Q96SN8 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms