Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
COL22A1Q8NFW1 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
COL22A1Q8NFW1 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
COL22A1Q8NFW1 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 RN7SKP162-201ENST00000363605 345 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 AL391422.1-201ENST00000402155 436 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 AC073909.1-201ENST00000447112 999 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 SUMO2P10-201ENST00000452006 288 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 RN7SL826P-201ENST00000479724 288 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 RN7SL705P-201ENST00000481678 294 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 AC026826.1-201ENST00000493002 361 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 AL589674.2-201ENST00000604304 337 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 AC034229.6-201ENST00000623704 224 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 AC104447.1-201ENST00000624214 2124 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 CASC19-222ENST00000641321 1173 ntBASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL22A1Q8NFW1 PSG10P-201ENST00000501199 1500 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 OR8B9P-202ENST00000642028 5216 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 RNU1-134P-201ENST00000362935 165 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 BX119321.1-201ENST00000428912 797 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 AL512593.1-201ENST00000444758 779 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 RPL36AP39-201ENST00000445859 318 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 AC006924.1-201ENST00000610750 559 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 RNA5SP514-201ENST00000363717 111 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 RN7SKP160-201ENST00000363804 340 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 BX323845.3-201ENST00000428215 527 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC8.51□□□□□ -1.05
COL22A1Q8NFW1 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 AC073429.2-201ENST00000569694 1444 ntBASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL22A1Q8NFW1 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms