Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC009166.2-201ENST00000624410 2833 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 NF1P8-201ENST00000415351 1461 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 OR2A20P-201ENST00000479887 2913 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 RNU4-68P-201ENST00000364314 141 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 PCNAP3-201ENST00000397222 778 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 RPL24P7-201ENST00000399435 453 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 SFR1P1-201ENST00000403720 688 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 USP9YP26-201ENST00000421008 661 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AL035407.1-201ENST00000429211 571 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC244505.2-201ENST00000435089 759 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AL451074.4-201ENST00000447545 470 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 RPL23AP23-201ENST00000452590 471 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 RPL31P3-201ENST00000458430 332 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 OR7E22P-201ENST00000478335 1035 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC084878.1-201ENST00000480555 648 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 MTND2P14-201ENST00000482139 351 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC006070.1-201ENST00000508151 193 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AP000926.4-201ENST00000527351 454 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 VDAC2P2-201ENST00000544463 901 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC024909.2-201ENST00000553035 286 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC136944.5-201ENST00000573021 151 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC002069.2-201ENST00000603580 883 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 Z82195.1-201ENST00000604558 398 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC079610.2-201ENST00000604818 690 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC012511.1-201ENST00000608140 449 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC123767.1-202ENST00000620407 817 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AL390318.1-201ENST00000624564 687 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AC104454.1-201ENST00000421341 1401 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 AL391380.1-201ENST00000439300 1432 ntBASIC6.93□□□□□ -1.3
NUP43Q8NFH3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP43Q8NFH3 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms