Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.86□□□□□ -1.31
RETP07949 RPS29P14-201ENST00000431518 171 ntBASIC6.86□□□□□ -1.31
RETP07949 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.86□□□□□ -1.31
RETP07949 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.86□□□□□ -1.31
RETP07949 GAPDHP59-201ENST00000435908 267 ntBASIC6.86□□□□□ -1.31
RETP07949 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.86□□□□□ -1.31
RETP07949 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RETP07949 AC131233.1-201ENST00000479200 955 ntBASIC6.86□□□□□ -1.31
RETP07949 RPL7P51-201ENST00000490532 749 ntBASIC6.86□□□□□ -1.31
RETP07949 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RETP07949 AC096754.1-201ENST00000508904 818 ntBASIC6.86□□□□□ -1.31
RETP07949 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.86□□□□□ -1.31
RETP07949 RN7SKP98-201ENST00000517070 156 ntBASIC6.86□□□□□ -1.31
RETP07949 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.86□□□□□ -1.31
RETP07949 OR52K3P-201ENST00000531655 943 ntBASIC6.86□□□□□ -1.31
RETP07949 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.86□□□□□ -1.31
RETP07949 AL078601.3-201ENST00000573303 535 ntBASIC6.86□□□□□ -1.31
RETP07949 AC012146.2-201ENST00000576545 416 ntBASIC6.86□□□□□ -1.31
RETP07949 MIR3135A-201ENST00000578460 77 ntBASIC6.86□□□□□ -1.31
RETP07949 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.86□□□□□ -1.31
RETP07949 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.86□□□□□ -1.31
RETP07949 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.86□□□□□ -1.31
RETP07949 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.86□□□□□ -1.31
RETP07949 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.86□□□□□ -1.31
RETP07949 SMIM12P1-201ENST00000603004 274 ntBASIC6.86□□□□□ -1.31
RETP07949 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.86□□□□□ -1.31
RETP07949 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.86□□□□□ -1.31
RETP07949 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.86□□□□□ -1.31
RETP07949 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.86□□□□□ -1.31
RETP07949 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
RETP07949 AC016251.2-201ENST00000623393 3089 ntBASIC6.86□□□□□ -1.31
RETP07949 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RETP07949 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
RETP07949 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.86□□□□□ -1.31
RETP07949 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RETP07949 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RETP07949 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.86□□□□□ -1.31
RETP07949 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RETP07949 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
RETP07949 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
RETP07949 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.85□□□□□ -1.31
RETP07949 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
RETP07949 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RETP07949 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RETP07949 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.85□□□□□ -1.31
RETP07949 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
RETP07949 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.85□□□□□ -1.31
RETP07949 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.85□□□□□ -1.31
RETP07949 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RETP07949 RNA5SP485-201ENST00000365053 119 ntBASIC6.85□□□□□ -1.31
RETP07949 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.85□□□□□ -1.31
RETP07949 FABP5P1-201ENST00000423401 411 ntBASIC6.85□□□□□ -1.31
RETP07949 RPL12P16-201ENST00000431098 498 ntBASIC6.85□□□□□ -1.31
RETP07949 FABP5P2-201ENST00000439042 408 ntBASIC6.85□□□□□ -1.31
RETP07949 AC011742.2-201ENST00000443818 352 ntBASIC6.85□□□□□ -1.31
RETP07949 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.85□□□□□ -1.31
RETP07949 H3F3AP5-201ENST00000475267 429 ntBASIC6.85□□□□□ -1.31
RETP07949 RPL23AP8-201ENST00000479812 475 ntBASIC6.85□□□□□ -1.31
RETP07949 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.85□□□□□ -1.31
RETP07949 SNX18P25-201ENST00000510539 758 ntBASIC6.85□□□□□ -1.31
RETP07949 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.85□□□□□ -1.31
RETP07949 ST13P6-201ENST00000522430 1102 ntBASIC6.85□□□□□ -1.31
RETP07949 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.85□□□□□ -1.31
RETP07949 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.85□□□□□ -1.31
RETP07949 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.85□□□□□ -1.31
RETP07949 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.85□□□□□ -1.31
RETP07949 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.85□□□□□ -1.31
RETP07949 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.85□□□□□ -1.31
RETP07949 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.85□□□□□ -1.31
RETP07949 AC137695.2-201ENST00000603123 754 ntBASIC6.85□□□□□ -1.31
RETP07949 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.85□□□□□ -1.31
RETP07949 AC063952.1-203ENST00000634410 658 ntBASIC6.85□□□□□ -1.31
RETP07949 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.85□□□□□ -1.31
RETP07949 AC093829.1-201ENST00000506662 1618 ntBASIC6.85□□□□□ -1.31
RETP07949 AC090771.1-201ENST00000585803 1618 ntBASIC6.85□□□□□ -1.31
RETP07949 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 MAPK10-383ENST00000642032 3390 ntBASIC6.85□□□□□ -1.31
RETP07949 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
RETP07949 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RETP07949 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
RETP07949 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
RETP07949 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.85□□□□□ -1.31
RETP07949 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms