Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC002090.1-201ENST00000625000 2138 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC073488.9-201ENST00000631601 754 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 CASC19-274ENST00000642018 970 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC125603.4-201ENST00000621942 2699 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 MTND2P9-201ENST00000422293 931 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 AL138899.2-201ENST00000439139 499 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC093166.3-201ENST00000448785 303 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC104339.1-201ENST00000465478 348 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC021074.2-201ENST00000468434 172 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 SCARNA5-201ENST00000516201 276 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 RN7SL208P-201ENST00000577964 296 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 AC114546.4-201ENST00000624413 369 ntBASIC7.82□□□□□ -1.16
HLA-DOAP06340 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-DOAP06340 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-DOAP06340 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 RNA5SP77-201ENST00000365394 120 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 RN7SL170P-201ENST00000487098 295 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 RPL37P23-201ENST00000492641 294 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC111000.5-201ENST00000506559 1178 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC018692.2-201ENST00000624130 348 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 AC073593.1-201ENST00000624500 411 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms