Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RN7SL518P-201ENST00000491887 280 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 NPM1P27-201ENST00000502784 830 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AL049869.4-201ENST00000555669 178 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AC087893.2-201ENST00000623272 255 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AC017037.4-201ENST00000624526 826 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AL121936.2-201ENST00000641935 662 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AC010329.1-201ENST00000593903 8328 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC092070.2-203ENST00000598377 3644 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 RNA5SP53-201ENST00000391299 120 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 SCDP1-201ENST00000455244 1081 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 CCNJP2-201ENST00000457810 1163 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC016489.1-201ENST00000461109 375 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 SNX18P23-201ENST00000510867 677 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 IGLC4-201ENST00000517690 248 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC073916.1-201ENST00000545095 130 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AC073263.3-201ENST00000624449 858 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 OR5AU1-204ENST00000641822 1197 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 NEK2P2-201ENST00000438441 1338 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 GOT2P1-201ENST00000440922 1309 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 AP002512.4-202ENST00000641599 4530 ntBASIC6.44□□□□□ -1.38
CCDC28BQ9BUN5 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AC140134.1-201ENST00000511830 3544 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 RPL23AP17-201ENST00000401064 499 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 RN7SKP296-201ENST00000411185 341 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 RPS7P12-201ENST00000422385 582 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AK3P5-201ENST00000432033 519 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AL390879.1-201ENST00000439143 386 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 BX005266.3-201ENST00000443013 1075 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms