Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HLA-CQ95604 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AC007068.1-201ENST00000396690 844 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 FCF1P10-201ENST00000407590 479 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 MIR1302-11-201ENST00000408051 138 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 MIR1302-9-201ENST00000408365 138 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 MIR1302-10-201ENST00000408734 138 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 RNA5SP209-201ENST00000411237 97 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AC009237.9-201ENST00000414800 347 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AL049758.1-201ENST00000423154 397 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 RPL12P4-201ENST00000432629 497 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 BTF3P10-201ENST00000433415 495 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AC013403.1-201ENST00000436954 263 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 ARMC4P1-201ENST00000438905 707 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AL450263.2-201ENST00000439400 589 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AC108039.2-201ENST00000440214 359 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AL353898.1-201ENST00000444055 238 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-CQ95604 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.67□□□□□ -1.02
HLA-CQ95604 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 RPL12P32-201ENST00000484010 494 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AC069439.1-201ENST00000494739 167 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AC008799.1-201ENST00000495909 457 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-CQ95604 MTCO1P35-201ENST00000515270 228 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-CQ95604 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 MOV10L1-209ENST00000540615 3941 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-CQ95604 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AC044913.1-201ENST00000557200 430 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AC073534.1-201ENST00000598671 1056 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AC012065.4-201ENST00000602445 679 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 MIR1302-2-201ENST00000607096 138 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AC005962.2-201ENST00000611427 652 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 AC011472.4-201ENST00000615848 491 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 GOLGA6D-202ENST00000618219 3210 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AC004696.2-201ENST00000624022 331 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-CQ95604 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HLA-CQ95604 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 NDST2-202ENST00000309979 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 TTLL5-201ENST00000286650 1595 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC097375.3-201ENST00000515329 2652 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 RN7SKP137-201ENST00000411074 307 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-CQ95604 TIMM9P3-201ENST00000428659 274 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 AC009299.1-201ENST00000429684 717 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AL512286.1-201ENST00000439244 400 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC079776.3-201ENST00000450665 370 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 HMGB1P5-202ENST00000451497 985 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 PNPLA4P1-201ENST00000458328 305 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC090589.1-201ENST00000473109 362 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 RBM43P1-201ENST00000476891 1081 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 RN7SL182P-201ENST00000496499 300 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 RN7SL612P-201ENST00000497704 295 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms