Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 AC068860.1-201ENST00000623701 3736 ntBASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 AC006116.1-201ENST00000587908 2171 ntBASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
TRIM48Q8IWZ4 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
TRIM48Q8IWZ4 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.09□□□□□ -1.28
TRIM48Q8IWZ4 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.09□□□□□ -1.28
TRIM48Q8IWZ4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
TRIM48Q8IWZ4 AC011379.1-201ENST00000508713 3025 ntBASIC7.09□□□□□ -1.28
TRIM48Q8IWZ4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 TRIM64EP-201ENST00000531233 1307 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 KYNUP2-201ENST00000582280 1329 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 RNU5E-10P-201ENST00000363506 118 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 RNU4-81P-201ENST00000363561 144 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC096533.1-201ENST00000411645 353 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AL139135.1-201ENST00000412675 209 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC009362.1-201ENST00000427253 406 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 MTND2P5-201ENST00000432656 1006 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AL035246.1-201ENST00000433554 1255 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 RPL14P5-201ENST00000436474 730 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 RPL29P7-201ENST00000440227 457 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC025271.1-201ENST00000485045 429 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 OR9N1P-202ENST00000494289 481 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 NACAP6-201ENST00000509572 622 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 HMGB1P47-201ENST00000511281 589 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 SNORA19.3-201ENST00000516165 130 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 RN7SL178P-201ENST00000582930 304 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC124016.2-201ENST00000610058 665 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 MIR1264-201ENST00000616374 69 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AL645927.2-201ENST00000618350 349 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC027506.1-201ENST00000621395 198 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC093909.6-201ENST00000624757 775 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC087565.3-202ENST00000642085 1603 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AC107980.1-201ENST00000558671 3355 ntBASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TRIM48Q8IWZ4 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms