Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CCL3L1P16619 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.42□□□□□ -1.54
CCL3L1P16619 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCL3L1P16619 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 UGT2B27P-201ENST00000505092 1620 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC5.41□□□□□ -1.54
CCL3L1P16619 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.41□□□□□ -1.54
CCL3L1P16619 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.41□□□□□ -1.54
CCL3L1P16619 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CCL3L1P16619 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CCL3L1P16619 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.41□□□□□ -1.54
CCL3L1P16619 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 AL139415.1-201ENST00000424862 352 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 RPEP4-201ENST00000437636 602 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 NPM1P23-201ENST00000440193 849 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 AC236972.4-201ENST00000458091 963 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 RPL23AP64-201ENST00000469465 435 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 AC015524.1-201ENST00000491585 472 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 SNORA58-201ENST00000505219 137 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CCL3L1P16619 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.41□□□□□ -1.54
CCL3L1P16619 AC083906.1-201ENST00000509298 406 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.41□□□□□ -1.54
CCL3L1P16619 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.41□□□□□ -1.54
CCL3L1P16619 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.41□□□□□ -1.54
CCL3L1P16619 AC084851.2-201ENST00000530377 364 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 AC026956.1-201ENST00000558741 396 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.41□□□□□ -1.54
CCL3L1P16619 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.41□□□□□ -1.54
CCL3L1P16619 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.41□□□□□ -1.54
CCL3L1P16619 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.41□□□□□ -1.54
CCL3L1P16619 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.41□□□□□ -1.54
CCL3L1P16619 OR7A11P-201ENST00000597719 953 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 MIR7854-201ENST00000620068 65 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 AC114546.4-201ENST00000624413 369 ntBASIC5.41□□□□□ -1.54
CCL3L1P16619 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.41□□□□□ -1.54
CCL3L1P16619 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCL3L1P16619 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.41□□□□□ -1.54
CCL3L1P16619 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.41□□□□□ -1.54
CCL3L1P16619 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.41□□□□□ -1.54
CCL3L1P16619 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCL3L1P16619 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.41□□□□□ -1.54
CCL3L1P16619 BRD7P1-201ENST00000557705 1915 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC5.4□□□□□ -1.54
CCL3L1P16619 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.4□□□□□ -1.54
CCL3L1P16619 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 AC087392.3-202ENST00000358446 1754 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 AC013488.1-201ENST00000526618 1838 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 AC025809.2-201ENST00000625085 1802 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 AC098614.1-202ENST00000634895 1830 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.4□□□□□ -1.54
CCL3L1P16619 SNORD94-201ENST00000386037 137 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.4□□□□□ -1.54
CCL3L1P16619 RPL5P20-201ENST00000403848 896 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 UBTFL2-201ENST00000411859 1191 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC5.4□□□□□ -1.54
CCL3L1P16619 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.4□□□□□ -1.54
CCL3L1P16619 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.4□□□□□ -1.54
CCL3L1P16619 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.4□□□□□ -1.54
CCL3L1P16619 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 AP003385.3-201ENST00000472498 287 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 RPS7P11-201ENST00000484240 586 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 RPL5P14-201ENST00000494197 878 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 RPL19P11-201ENST00000495944 589 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 AC093870.1-201ENST00000506837 213 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 MRPS5P3-201ENST00000515577 166 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.4□□□□□ -1.54
CCL3L1P16619 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.4□□□□□ -1.54
CCL3L1P16619 AC092718.4-201ENST00000566639 716 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms