Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN2BO60939 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN2BO60939 AC091304.4-201ENST00000565703 620 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.28□□□□□ -1.4
SCN2BO60939 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.28□□□□□ -1.4
SCN2BO60939 ACTG1P22-201ENST00000603793 1099 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AC137695.1-201ENST00000604126 489 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AL353807.4-201ENST00000604995 257 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AC006328.2-201ENST00000623198 397 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AC005753.1-201ENST00000623837 618 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AC012005.2-201ENST00000624333 397 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AC061999.1-201ENST00000624454 177 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN2BO60939 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SCN2BO60939 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.28□□□□□ -1.4
SCN2BO60939 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN2BO60939 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SCN2BO60939 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 AC007114.2-201ENST00000576014 4281 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 AC022613.3-201ENST00000560740 1346 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
SCN2BO60939 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SCN2BO60939 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.27□□□□□ -1.41
SCN2BO60939 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.27□□□□□ -1.41
SCN2BO60939 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.27□□□□□ -1.41
SCN2BO60939 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 RNU1-46P-201ENST00000384425 164 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.27□□□□□ -1.41
SCN2BO60939 AC097721.1-201ENST00000427150 1253 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 RPL26P30-201ENST00000453533 435 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 RPL7AP23-201ENST00000482625 776 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 AC025271.1-201ENST00000485045 429 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.27□□□□□ -1.41
SCN2BO60939 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.27□□□□□ -1.41
SCN2BO60939 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.27□□□□□ -1.41
SCN2BO60939 AC084337.1-201ENST00000524809 686 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.27□□□□□ -1.41
SCN2BO60939 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.27□□□□□ -1.41
SCN2BO60939 AL445383.1-201ENST00000554689 874 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC6.27□□□□□ -1.41
SCN2BO60939 AP003115.1-201ENST00000569849 463 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 RN7SL689P-201ENST00000577215 297 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.27□□□□□ -1.41
SCN2BO60939 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.27□□□□□ -1.41
SCN2BO60939 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.27□□□□□ -1.41
SCN2BO60939 AC024085.1-201ENST00000604299 432 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 AC091193.1-201ENST00000604640 448 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 PTCHD3P1-201ENST00000612350 537 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.27□□□□□ -1.41
SCN2BO60939 AC018692.2-201ENST00000624130 348 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 AC114546.4-201ENST00000624413 369 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 AC093909.6-201ENST00000624757 775 ntBASIC6.27□□□□□ -1.41
SCN2BO60939 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
SCN2BO60939 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.27□□□□□ -1.41
SCN2BO60939 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.27□□□□□ -1.41
SCN2BO60939 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN2BO60939 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SCN2BO60939 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.26□□□□□ -1.41
SCN2BO60939 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.26□□□□□ -1.41
SCN2BO60939 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.26□□□□□ -1.41
SCN2BO60939 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.26□□□□□ -1.41
SCN2BO60939 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.26□□□□□ -1.41
SCN2BO60939 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCN2BO60939 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SCN2BO60939 RN7SKP118-201ENST00000364331 330 ntBASIC6.26□□□□□ -1.41
SCN2BO60939 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.26□□□□□ -1.41
SCN2BO60939 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms