Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 U3.31-201ENST00000408113 216 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 RN7SKP207-201ENST00000411204 303 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC004022.2-201ENST00000413824 193 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC023141.10-201ENST00000415634 200 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 CR391992.1-201ENST00000438601 394 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC019185.3-201ENST00000438805 323 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 MTATP6P23-201ENST00000440153 476 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 XKRY2-201ENST00000442362 1093 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 RPL7L1P11-201ENST00000446092 721 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AL031736.1-201ENST00000449688 618 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 OR52J1P-201ENST00000450596 932 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 OR9N1P-202ENST00000494289 481 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC111000.2-201ENST00000507775 550 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 MTND3P5-201ENST00000512798 333 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 RNU6-889P-201ENST00000517189 103 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 SNX18P27-201ENST00000523611 779 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 FOLH1B-202ENST00000529567 2145 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AL049869.4-201ENST00000555669 178 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC068135.2-201ENST00000569293 1028 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 MIR4685-201ENST00000578185 69 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC005518.2-201ENST00000603254 282 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC016405.2-201ENST00000607393 312 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC135050.6-202ENST00000613584 392 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC121761.2-201ENST00000617300 689 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC007204.1-201ENST00000621794 555 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC018659.2-201ENST00000624690 715 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 TRIM60P14-201ENST00000513444 1419 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 NBPF8-201ENST00000583271 5330 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 CASC19-255ENST00000641733 1385 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 ZNF542P-204ENST00000482727 1305 ntBASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 AL359922.2-201ENST00000581788 3017 ntBASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 Y_RNA.62-201ENST00000362840 99 ntBASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 PTMAP8-201ENST00000397729 342 ntBASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 GAS8-AS1-201ENST00000408886 435 ntBASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 SNORA79B-201ENST00000410557 148 ntBASIC6.29□□□□□ -1.4
SSBP3Q9BWW4 MTCO3P41-201ENST00000414801 328 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms