Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC002504.1-201ENST00000438281 691 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 GSTA7P-201ENST00000438425 448 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AL353662.1-201ENST00000439099 327 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 RNA5SP206-201ENST00000516703 121 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC018692.2-201ENST00000624130 348 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 EIF3EP1-201ENST00000433978 1316 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 UBTFL11-201ENST00000428234 2252 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC078795.1-201ENST00000602342 3143 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 U3.43-201ENST00000410734 213 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 HMGB1P32-201ENST00000425971 565 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 DEFA9P-201ENST00000433042 285 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 CXCR2P1-202ENST00000443392 1074 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AC083806.1-201ENST00000468934 316 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 NDUFA5P12-201ENST00000503796 343 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 CR383656.6-201ENST00000550518 394 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 ELOCP28-201ENST00000590044 317 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AC004908.1-201ENST00000606572 541 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AC116667.2-201ENST00000641075 823 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 RN7SKP174-201ENST00000363803 330 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL035660.1-201ENST00000422041 222 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AC103563.5-201ENST00000455643 364 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 SULT1D1P-201ENST00000458020 882 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL672167.3-201ENST00000465951 960 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 COPS8P2-201ENST00000473228 627 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL671862.1-201ENST00000515851 349 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL512652.1-201ENST00000619006 500 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AC145138.1-201ENST00000512908 2851 ntBASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 LINC01910-201ENST00000582251 2637 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RIF1Q5UIP0 SNORA38B-201ENST00000363524 131 ntBASIC6.43□□□□□ -1.38
RIF1Q5UIP0 SNORA11-201ENST00000408789 128 ntBASIC6.43□□□□□ -1.38
RIF1Q5UIP0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RIF1Q5UIP0 PAICSP2-201ENST00000429118 1150 ntBASIC6.43□□□□□ -1.38
RIF1Q5UIP0 AL645936.1-201ENST00000441979 518 ntBASIC6.43□□□□□ -1.38
RIF1Q5UIP0 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.43□□□□□ -1.38
RIF1Q5UIP0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.43□□□□□ -1.38
RIF1Q5UIP0 RN7SL216P-201ENST00000471607 298 ntBASIC6.43□□□□□ -1.38
RIF1Q5UIP0 RN7SL826P-201ENST00000479724 288 ntBASIC6.43□□□□□ -1.38
RIF1Q5UIP0 AC006499.3-201ENST00000506077 748 ntBASIC6.43□□□□□ -1.38
RIF1Q5UIP0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms