Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FLII-230ENST00000628188 156 ntTSL 5 BASIC5.63□□□□□ -1.51
AP3S2P59780 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.63□□□□□ -1.51
AP3S2P59780 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 AP002800.1-201ENST00000624982 2225 ntBASIC5.63□□□□□ -1.51
AP3S2P59780 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
AP3S2P59780 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP3S2P59780 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.62□□□□□ -1.51
AP3S2P59780 AL359976.1-201ENST00000418655 3528 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
AP3S2P59780 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
AP3S2P59780 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
AP3S2P59780 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 AC117434.1-201ENST00000419971 836 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 REREP1Y-201ENST00000422655 198 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.62□□□□□ -1.51
AP3S2P59780 PAICSP2-201ENST00000429118 1150 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
AP3S2P59780 REREP2Y-201ENST00000439103 200 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.62□□□□□ -1.51
AP3S2P59780 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC5.62□□□□□ -1.51
AP3S2P59780 GOT2P2-201ENST00000450663 1251 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 MEF2AP1-201ENST00000454867 863 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.62□□□□□ -1.51
AP3S2P59780 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC5.62□□□□□ -1.51
AP3S2P59780 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.62□□□□□ -1.51
AP3S2P59780 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC5.62□□□□□ -1.51
AP3S2P59780 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.62□□□□□ -1.51
AP3S2P59780 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.62□□□□□ -1.51
AP3S2P59780 BCAS2P1-201ENST00000528022 632 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC5.62□□□□□ -1.51
AP3S2P59780 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC5.62□□□□□ -1.51
AP3S2P59780 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.62□□□□□ -1.51
AP3S2P59780 OR4H6P-201ENST00000563771 921 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.62□□□□□ -1.51
AP3S2P59780 OR7E94P-202ENST00000601375 790 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 BUB1P1-201ENST00000603541 607 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 AL356986.1-201ENST00000604085 341 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 AL157899.1-201ENST00000604110 936 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 AL035410.2-201ENST00000604963 864 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 AC093388.1-201ENST00000609166 430 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.62□□□□□ -1.51
AP3S2P59780 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.62□□□□□ -1.51
AP3S2P59780 AC135068.11-201ENST00000636378 921 ntBASIC5.62□□□□□ -1.51
AP3S2P59780 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.62□□□□□ -1.51
AP3S2P59780 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
AP3S2P59780 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.62□□□□□ -1.51
AP3S2P59780 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.62□□□□□ -1.51
AP3S2P59780 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AP3S2P59780 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
AP3S2P59780 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
AP3S2P59780 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.62□□□□□ -1.51
AP3S2P59780 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.61□□□□□ -1.51
AP3S2P59780 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
AP3S2P59780 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.61□□□□□ -1.51
AP3S2P59780 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 RNA5SP71-201ENST00000362967 126 ntBASIC5.61□□□□□ -1.51
AP3S2P59780 SNORA70.3-201ENST00000365075 132 ntBASIC5.61□□□□□ -1.51
AP3S2P59780 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.61□□□□□ -1.51
AP3S2P59780 HMGB1P39-201ENST00000366304 880 ntBASIC5.61□□□□□ -1.51
AP3S2P59780 RNA5SP35-201ENST00000391257 129 ntBASIC5.61□□□□□ -1.51
AP3S2P59780 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 MSRB1P1-201ENST00000396851 354 ntBASIC5.61□□□□□ -1.51
AP3S2P59780 RN7SKP296-201ENST00000411185 341 ntBASIC5.61□□□□□ -1.51
AP3S2P59780 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.61□□□□□ -1.51
AP3S2P59780 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
AP3S2P59780 GAPDHP57-201ENST00000424400 585 ntBASIC5.61□□□□□ -1.51
AP3S2P59780 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.61□□□□□ -1.51
AP3S2P59780 AL645936.2-201ENST00000430565 928 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms