Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.38□□□□□ -1.39
CLRN1P58418 SPATA31C2-201ENST00000324915 3777 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.38□□□□□ -1.39
CLRN1P58418 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.38□□□□□ -1.39
CLRN1P58418 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.38□□□□□ -1.39
CLRN1P58418 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CLRN1P58418 MIR16-2-201ENST00000362117 81 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CLRN1P58418 AL590762.1-201ENST00000391782 432 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 RNU4-27P-201ENST00000410889 139 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 NIFKP3-201ENST00000417799 865 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 OR5P4P-201ENST00000424698 917 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 AC092865.3-201ENST00000425390 1026 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CLRN1P58418 AL161626.1-201ENST00000441480 490 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 AGKP1-201ENST00000455254 1263 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 AC096992.1-201ENST00000459808 709 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 NPM1P29-201ENST00000483112 803 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 PPM1AP1-201ENST00000502740 1135 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 AC112225.1-201ENST00000508230 297 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 AC118942.1-201ENST00000529674 1035 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.38□□□□□ -1.39
CLRN1P58418 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.38□□□□□ -1.39
CLRN1P58418 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.38□□□□□ -1.39
CLRN1P58418 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.38□□□□□ -1.39
CLRN1P58418 PRR13P3-201ENST00000603578 376 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 AC104184.1-201ENST00000607513 721 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.38□□□□□ -1.39
CLRN1P58418 AC027271.1-201ENST00000610270 610 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 AL356752.1-201ENST00000615844 593 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 CYCSP41-201ENST00000616920 296 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CLRN1P58418 AL049869.1-201ENST00000556933 1402 ntBASIC6.38□□□□□ -1.39
CLRN1P58418 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CLRN1P58418 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLRN1P58418 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
CLRN1P58418 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CLRN1P58418 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 BX322650.1-201ENST00000332359 2143 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 ZNF29P-201ENST00000225587 168 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 RNU5E-10P-201ENST00000363506 118 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 RNU6-1017P-201ENST00000363613 106 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 RNA5SP427-201ENST00000365323 119 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AC006511.2-201ENST00000388966 660 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 TAS2R15P-201ENST00000390674 928 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 CXADRP1-201ENST00000398098 1095 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 ST13P16-201ENST00000401760 781 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.37□□□□□ -1.39
CLRN1P58418 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.37□□□□□ -1.39
CLRN1P58418 CYP4F32P-201ENST00000426492 504 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AF274573.1-201ENST00000430535 494 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms