Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.31□□□□□ -1.24
VCPP55072 PSMC1P2-201ENST00000423961 1204 ntBASIC7.31□□□□□ -1.24
VCPP55072 AC000089.1-201ENST00000424559 801 ntBASIC7.31□□□□□ -1.24
VCPP55072 DUTP4-201ENST00000424782 475 ntBASIC7.31□□□□□ -1.24
VCPP55072 LYPLA1P1-201ENST00000434514 622 ntBASIC7.31□□□□□ -1.24
VCPP55072 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VCPP55072 OR51P1P-201ENST00000447547 942 ntBASIC7.31□□□□□ -1.24
VCPP55072 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.31□□□□□ -1.24
VCPP55072 LPAL2-203ENST00000454031 2498 ntBASIC7.31□□□□□ -1.24
VCPP55072 NMNAT1P3-201ENST00000457517 888 ntBASIC7.31□□□□□ -1.24
VCPP55072 AP000805.1-201ENST00000471604 784 ntBASIC7.31□□□□□ -1.24
VCPP55072 AC026254.2-201ENST00000475295 371 ntBASIC7.31□□□□□ -1.24
VCPP55072 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.31□□□□□ -1.24
VCPP55072 RN7SL37P-201ENST00000490461 307 ntBASIC7.31□□□□□ -1.24
VCPP55072 AC018797.1-201ENST00000510791 255 ntBASIC7.31□□□□□ -1.24
VCPP55072 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.31□□□□□ -1.24
VCPP55072 AC093878.1-201ENST00000515630 432 ntBASIC7.31□□□□□ -1.24
VCPP55072 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.31□□□□□ -1.24
VCPP55072 AC084121.1-201ENST00000533882 835 ntBASIC7.31□□□□□ -1.24
VCPP55072 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.31□□□□□ -1.24
VCPP55072 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VCPP55072 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.31□□□□□ -1.24
VCPP55072 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.31□□□□□ -1.24
VCPP55072 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.31□□□□□ -1.24
VCPP55072 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
VCPP55072 AC073263.3-201ENST00000624449 858 ntBASIC7.31□□□□□ -1.24
VCPP55072 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.31□□□□□ -1.24
VCPP55072 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VCPP55072 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.31□□□□□ -1.24
VCPP55072 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
VCPP55072 AC087392.3-202ENST00000358446 1754 ntBASIC7.31□□□□□ -1.24
VCPP55072 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VCPP55072 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.3□□□□□ -1.24
VCPP55072 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VCPP55072 OR2AH1P-202ENST00000641232 2744 ntBASIC7.3□□□□□ -1.24
VCPP55072 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.3□□□□□ -1.24
VCPP55072 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VCPP55072 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VCPP55072 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
VCPP55072 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VCPP55072 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.3□□□□□ -1.24
VCPP55072 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
VCPP55072 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.3□□□□□ -1.24
VCPP55072 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VCPP55072 RNU1-24P-201ENST00000364285 165 ntBASIC7.3□□□□□ -1.24
VCPP55072 RNA5SP433-201ENST00000364491 114 ntBASIC7.3□□□□□ -1.24
VCPP55072 RNU1-55P-201ENST00000365510 158 ntBASIC7.3□□□□□ -1.24
VCPP55072 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.3□□□□□ -1.24
VCPP55072 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VCPP55072 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.3□□□□□ -1.24
VCPP55072 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.3□□□□□ -1.24
VCPP55072 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.3□□□□□ -1.24
VCPP55072 AP005902.2-201ENST00000518393 307 ntBASIC7.3□□□□□ -1.24
VCPP55072 OR4A21P-201ENST00000532759 944 ntBASIC7.3□□□□□ -1.24
VCPP55072 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.3□□□□□ -1.24
VCPP55072 AC016144.1-201ENST00000548175 1087 ntBASIC7.3□□□□□ -1.24
VCPP55072 DPPA3P2-201ENST00000553589 478 ntBASIC7.3□□□□□ -1.24
VCPP55072 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.3□□□□□ -1.24
VCPP55072 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.3□□□□□ -1.24
VCPP55072 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.3□□□□□ -1.24
VCPP55072 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.3□□□□□ -1.24
VCPP55072 PRR13P5-201ENST00000596581 442 ntBASIC7.3□□□□□ -1.24
VCPP55072 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.3□□□□□ -1.24
VCPP55072 AC127070.3-201ENST00000503695 3263 ntBASIC7.3□□□□□ -1.24
VCPP55072 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VCPP55072 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.3□□□□□ -1.24
VCPP55072 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
VCPP55072 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.3□□□□□ -1.24
VCPP55072 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.3□□□□□ -1.24
VCPP55072 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.29□□□□□ -1.24
VCPP55072 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 AC073342.2-201ENST00000595842 1800 ntBASIC7.29□□□□□ -1.24
VCPP55072 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.29□□□□□ -1.24
VCPP55072 CASC19-243ENST00000641588 1546 ntBASIC7.29□□□□□ -1.24
VCPP55072 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 RN7SKP130-201ENST00000364924 301 ntBASIC7.29□□□□□ -1.24
VCPP55072 RNA5SP172-201ENST00000365061 118 ntBASIC7.29□□□□□ -1.24
VCPP55072 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.29□□□□□ -1.24
VCPP55072 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.29□□□□□ -1.24
VCPP55072 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.29□□□□□ -1.24
VCPP55072 MTND6P1-201ENST00000417434 424 ntBASIC7.29□□□□□ -1.24
VCPP55072 CHCHD3P1-201ENST00000425516 676 ntBASIC7.29□□□□□ -1.24
VCPP55072 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.29□□□□□ -1.24
VCPP55072 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.29□□□□□ -1.24
VCPP55072 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.29□□□□□ -1.24
VCPP55072 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.29□□□□□ -1.24
VCPP55072 AC093719.1-201ENST00000480427 441 ntBASIC7.29□□□□□ -1.24
VCPP55072 RPS27P20-201ENST00000492051 246 ntBASIC7.29□□□□□ -1.24
VCPP55072 IGKV2D-38-201ENST00000518423 240 ntBASIC7.29□□□□□ -1.24
VCPP55072 AC006512.2-201ENST00000543250 486 ntBASIC7.29□□□□□ -1.24
VCPP55072 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.29□□□□□ -1.24
VCPP55072 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.29□□□□□ -1.24
VCPP55072 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms