Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.22□□□□□ -1.41
RFC3P40938 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 RNU1-5P-201ENST00000362684 144 ntBASIC6.22□□□□□ -1.41
RFC3P40938 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RFC3P40938 PFN1P11-201ENST00000445829 389 ntBASIC6.22□□□□□ -1.41
RFC3P40938 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.22□□□□□ -1.41
RFC3P40938 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.22□□□□□ -1.41
RFC3P40938 MEF2AP1-201ENST00000454867 863 ntBASIC6.22□□□□□ -1.41
RFC3P40938 AC099670.1-201ENST00000455141 783 ntBASIC6.22□□□□□ -1.41
RFC3P40938 RN7SL83P-201ENST00000468131 297 ntBASIC6.22□□□□□ -1.41
RFC3P40938 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 RN7SL143P-201ENST00000496780 297 ntBASIC6.22□□□□□ -1.41
RFC3P40938 SNX18P23-201ENST00000510867 677 ntBASIC6.22□□□□□ -1.41
RFC3P40938 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.22□□□□□ -1.41
RFC3P40938 AC116917.1-201ENST00000520558 305 ntBASIC6.22□□□□□ -1.41
RFC3P40938 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.22□□□□□ -1.41
RFC3P40938 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.22□□□□□ -1.41
RFC3P40938 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.22□□□□□ -1.41
RFC3P40938 AL355377.1-201ENST00000621125 1653 ntBASIC6.22□□□□□ -1.41
RFC3P40938 AL451064.2-201ENST00000623514 1654 ntBASIC6.22□□□□□ -1.41
RFC3P40938 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RFC3P40938 ZNF402P-201ENST00000404435 3100 ntBASIC6.22□□□□□ -1.41
RFC3P40938 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 AL117378.2-201ENST00000622916 1337 ntBASIC6.22□□□□□ -1.41
RFC3P40938 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.22□□□□□ -1.41
RFC3P40938 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.22□□□□□ -1.41
RFC3P40938 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
RFC3P40938 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RFC3P40938 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.41
RFC3P40938 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.21□□□□□ -1.41
RFC3P40938 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.21□□□□□ -1.41
RFC3P40938 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFC3P40938 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RFC3P40938 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFC3P40938 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RFC3P40938 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFC3P40938 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFC3P40938 FDPSP5-201ENST00000399474 1057 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.21□□□□□ -1.42
RFC3P40938 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.21□□□□□ -1.42
RFC3P40938 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 AKR1B10P1-201ENST00000425765 942 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 NPM1P23-201ENST00000440193 849 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 DEFA11P-201ENST00000446470 261 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AL451063.1-201ENST00000450164 1133 ntBASIC6.21□□□□□ -1.42
RFC3P40938 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.21□□□□□ -1.42
RFC3P40938 RPL29P23-201ENST00000486188 442 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 AC084851.2-201ENST00000530377 364 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 CTSLP2-201ENST00000580501 394 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.21□□□□□ -1.42
RFC3P40938 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.21□□□□□ -1.42
RFC3P40938 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 AC007255.2-201ENST00000604053 631 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AL590032.1-201ENST00000604920 252 ntBASIC6.21□□□□□ -1.42
RFC3P40938 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.21□□□□□ -1.42
RFC3P40938 AC004908.1-201ENST00000606572 541 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.21□□□□□ -1.42
RFC3P40938 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.21□□□□□ -1.42
RFC3P40938 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFC3P40938 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFC3P40938 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFC3P40938 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFC3P40938 AL359263.1-201ENST00000441188 2796 ntBASIC6.21□□□□□ -1.42
RFC3P40938 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.21□□□□□ -1.42
RFC3P40938 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFC3P40938 ZNF806-201ENST00000438300 1774 ntBASIC6.21□□□□□ -1.42
RFC3P40938 MARK2P4-201ENST00000503381 2380 ntBASIC6.21□□□□□ -1.42
RFC3P40938 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RFC3P40938 TATDN2P3-201ENST00000452855 3665 ntBASIC6.2□□□□□ -1.42
RFC3P40938 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms