Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
COL15A1P39059 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
COL15A1P39059 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
COL15A1P39059 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
COL15A1P39059 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
COL15A1P39059 AL359092.1-201ENST00000417156 265 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC8.37□□□□□ -1.07
COL15A1P39059 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 HMGB1P7-201ENST00000450921 612 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.37□□□□□ -1.07
COL15A1P39059 AC114982.2-201ENST00000461396 358 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 RPL19P11-201ENST00000495944 589 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.37□□□□□ -1.07
COL15A1P39059 AC122713.1-201ENST00000518368 1015 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 AC009879.1-201ENST00000520029 839 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC8.37□□□□□ -1.07
COL15A1P39059 NPIPB14P-203ENST00000532298 987 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC8.37□□□□□ -1.07
COL15A1P39059 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.37□□□□□ -1.07
COL15A1P39059 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 AC091167.5-201ENST00000605689 894 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 AL136097.3-201ENST00000611097 505 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC8.37□□□□□ -1.07
COL15A1P39059 MIR6811-201ENST00000620409 58 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC8.37□□□□□ -1.07
COL15A1P39059 AC073488.6-201ENST00000632293 754 ntBASIC8.37□□□□□ -1.07
COL15A1P39059 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC8.37□□□□□ -1.07
COL15A1P39059 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
COL15A1P39059 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
COL15A1P39059 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.37□□□□□ -1.07
COL15A1P39059 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
COL15A1P39059 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 RNA5SP65-201ENST00000363166 119 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 RN7SKP108-201ENST00000411367 328 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 MTND2P12-201ENST00000417560 1252 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC8.36□□□□□ -1.07
COL15A1P39059 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC8.36□□□□□ -1.07
COL15A1P39059 AL354707.3-201ENST00000427308 331 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 OR52I1-201ENST00000450052 1050 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.36□□□□□ -1.07
COL15A1P39059 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.36□□□□□ -1.07
COL15A1P39059 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.36□□□□□ -1.07
COL15A1P39059 ODF1-202ENST00000518835 368 ntTSL 3 BASIC8.36□□□□□ -1.07
COL15A1P39059 OR4A13P-201ENST00000529316 942 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 OR7A1P-201ENST00000601206 970 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 AL138895.2-201ENST00000603019 178 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 AC108865.2-201ENST00000606881 432 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC8.36□□□□□ -1.07
COL15A1P39059 BX323046.1-201ENST00000610145 535 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
COL15A1P39059 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.36□□□□□ -1.07
COL15A1P39059 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.36□□□□□ -1.07
COL15A1P39059 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 VN2R1P-201ENST00000449668 1743 ntBASIC8.36□□□□□ -1.07
COL15A1P39059 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
COL15A1P39059 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
COL15A1P39059 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.36□□□□□ -1.07
COL15A1P39059 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
COL15A1P39059 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.36□□□□□ -1.07
COL15A1P39059 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
COL15A1P39059 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
COL15A1P39059 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.36□□□□□ -1.07
COL15A1P39059 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
COL15A1P39059 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms