Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.7□□□□□ -1.18
COL4A5P29400 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 AP001823.1-201ENST00000604056 1003 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 AC022106.1-201ENST00000612834 766 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 AL136228.1-201ENST00000622221 319 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 AC073488.3-201ENST00000631611 778 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC7.69□□□□□ -1.18
COL4A5P29400 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.69□□□□□ -1.18
COL4A5P29400 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.69□□□□□ -1.18
COL4A5P29400 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.69□□□□□ -1.18
COL4A5P29400 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC7.69□□□□□ -1.18
COL4A5P29400 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.69□□□□□ -1.18
COL4A5P29400 SNORA21-201ENST00000362423 132 ntBASIC7.69□□□□□ -1.18
COL4A5P29400 SNORD16-201ENST00000362803 99 ntBASIC7.69□□□□□ -1.18
COL4A5P29400 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.69□□□□□ -1.18
COL4A5P29400 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.69□□□□□ -1.18
COL4A5P29400 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 CFL1P4-201ENST00000451536 498 ntBASIC7.69□□□□□ -1.18
COL4A5P29400 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.69□□□□□ -1.18
COL4A5P29400 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.69□□□□□ -1.18
COL4A5P29400 RPL5P11-201ENST00000498068 893 ntBASIC7.69□□□□□ -1.18
COL4A5P29400 OR4A13P-201ENST00000529316 942 ntBASIC7.69□□□□□ -1.18
COL4A5P29400 AP001858.2-201ENST00000536213 601 ntBASIC7.69□□□□□ -1.18
COL4A5P29400 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.69□□□□□ -1.18
COL4A5P29400 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.69□□□□□ -1.18
COL4A5P29400 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.69□□□□□ -1.18
COL4A5P29400 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
COL4A5P29400 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.69□□□□□ -1.18
COL4A5P29400 CTH-203ENST00000411986 2044 ntTSL 2 BASIC7.69□□□□□ -1.18
COL4A5P29400 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.69□□□□□ -1.18
COL4A5P29400 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC7.69□□□□□ -1.18
COL4A5P29400 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL4A5P29400 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.69□□□□□ -1.18
COL4A5P29400 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.68□□□□□ -1.18
COL4A5P29400 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.68□□□□□ -1.18
COL4A5P29400 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.68□□□□□ -1.18
COL4A5P29400 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.68□□□□□ -1.18
COL4A5P29400 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
COL4A5P29400 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
COL4A5P29400 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
COL4A5P29400 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
COL4A5P29400 MARK2P12-201ENST00000420129 585 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 Z68868.1-201ENST00000429048 544 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
COL4A5P29400 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.68□□□□□ -1.18
COL4A5P29400 AC016908.1-201ENST00000442571 1219 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.68□□□□□ -1.18
COL4A5P29400 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.68□□□□□ -1.18
COL4A5P29400 RPSAP39-201ENST00000467439 883 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 RN7SL714P-201ENST00000487050 298 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.68□□□□□ -1.18
COL4A5P29400 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.68□□□□□ -1.18
COL4A5P29400 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.68□□□□□ -1.18
COL4A5P29400 RPA2P1-201ENST00000556557 721 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 AP005119.1-201ENST00000580956 292 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.68□□□□□ -1.18
COL4A5P29400 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.68□□□□□ -1.18
COL4A5P29400 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 AC010998.3-201ENST00000613871 631 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 AL049767.1-202ENST00000637826 242 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC7.68□□□□□ -1.18
COL4A5P29400 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 AC015689.2-201ENST00000528172 1738 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.68□□□□□ -1.18
COL4A5P29400 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.68□□□□□ -1.18
COL4A5P29400 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
COL4A5P29400 AF287957.1-201ENST00000607368 1595 ntBASIC7.68□□□□□ -1.18
COL4A5P29400 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
COL4A5P29400 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
COL4A5P29400 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.68□□□□□ -1.18
COL4A5P29400 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL4A5P29400 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL4A5P29400 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
COL4A5P29400 OR3D1P-201ENST00000438288 955 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms