Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 Z82209.2-201ENST00000623410 2012 ntBASIC6.12□□□□□ -1.43
SPTA1P02549 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SPTA1P02549 RNA5SP474-201ENST00000391234 90 ntBASIC6.12□□□□□ -1.43
SPTA1P02549 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.12□□□□□ -1.43
SPTA1P02549 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.12□□□□□ -1.43
SPTA1P02549 AL929472.1-201ENST00000417484 429 ntBASIC6.12□□□□□ -1.43
SPTA1P02549 AL360013.1-201ENST00000419031 858 ntBASIC6.12□□□□□ -1.43
SPTA1P02549 VN1R20P-201ENST00000425215 966 ntBASIC6.12□□□□□ -1.43
SPTA1P02549 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.12□□□□□ -1.43
SPTA1P02549 MYO5BP2-201ENST00000449815 1277 ntBASIC6.12□□□□□ -1.43
SPTA1P02549 PSMA6P2-201ENST00000457574 686 ntBASIC6.12□□□□□ -1.43
SPTA1P02549 IGKV2-18-201ENST00000522607 343 ntBASIC6.12□□□□□ -1.43
SPTA1P02549 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.12□□□□□ -1.43
SPTA1P02549 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SPTA1P02549 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SPTA1P02549 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.12□□□□□ -1.43
SPTA1P02549 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 CD46-209ENST00000367047 3089 ntTSL 5 BASIC6.12□□□□□ -1.43
SPTA1P02549 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.12□□□□□ -1.43
SPTA1P02549 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.11□□□□□ -1.43
SPTA1P02549 AC003045.1-201ENST00000398779 713 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 AL359694.1-201ENST00000403247 604 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.11□□□□□ -1.43
SPTA1P02549 AC010240.2-201ENST00000445363 1205 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.11□□□□□ -1.43
SPTA1P02549 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.11□□□□□ -1.43
SPTA1P02549 CDH12P4-201ENST00000517835 295 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 CDH12P3-201ENST00000517935 295 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 CDH12P1-201ENST00000518435 295 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.11□□□□□ -1.43
SPTA1P02549 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.11□□□□□ -1.43
SPTA1P02549 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.11□□□□□ -1.43
SPTA1P02549 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 KARSP2-201ENST00000415696 1639 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 AC104581.5-201ENST00000624171 7141 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 AC123769.1-201ENST00000530992 3192 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 AC004491.1-201ENST00000623029 1882 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SPTA1P02549 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 MIR143-201ENST00000385300 106 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 Y_RNA.625-201ENST00000411256 107 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.11□□□□□ -1.43
SPTA1P02549 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC6.11□□□□□ -1.43
SPTA1P02549 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.11□□□□□ -1.43
SPTA1P02549 NUCKS1P1-201ENST00000452067 703 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 RPL26P30-201ENST00000453533 435 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 RN7SL515P-201ENST00000463999 297 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 RN7SL379P-201ENST00000479912 293 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.11□□□□□ -1.43
SPTA1P02549 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.11□□□□□ -1.43
SPTA1P02549 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.11□□□□□ -1.43
SPTA1P02549 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.11□□□□□ -1.43
SPTA1P02549 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.11□□□□□ -1.43
SPTA1P02549 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
SPTA1P02549 TPTE2P2-201ENST00000403471 1466 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 BRD7P2-201ENST00000466133 1944 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 AC138915.4-201ENST00000565549 4147 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SPTA1P02549 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 RBPJP7-201ENST00000442803 1447 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 RBPJP5-201ENST00000449433 1447 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 AC005702.3-201ENST00000585345 1447 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms