Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 VN1R54P-201ENST00000435210 1049 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 PSMD10P3-201ENST00000437000 448 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AL122020.1-201ENST00000472287 459 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 RN7SL326P-201ENST00000477493 296 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 RPSAP50-201ENST00000481955 852 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AC024558.1-201ENST00000505008 528 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AP001496.3-201ENST00000580230 913 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AL022394.1-201ENST00000606979 292 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AC125238.2-201ENST00000430003 1440 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AC079753.1-201ENST00000623243 3868 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 ATG13-207ENST00000526508 4199 ntTSL 5 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 CASC15-203ENST00000605917 4461 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AL109941.1-201ENST00000401925 229 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AC245096.1-201ENST00000413104 546 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AC012075.1-201ENST00000436549 580 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AC022415.1-202ENST00000486612 523 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AC007686.1-201ENST00000488511 463 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AP000676.2-201ENST00000529711 301 ntBASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
RIMBP3Q9UFD9 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 AL139805.2-201ENST00000455305 2433 ntBASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 UBTFL11-201ENST00000428234 2252 ntBASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 HM13-224ENST00000498035 3932 ntTSL 2 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 RN7SL172P-201ENST00000460535 303 ntBASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 RPS23P6-201ENST00000466136 431 ntBASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 AC006463.2-201ENST00000473326 348 ntBASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 OXSM-209ENST00000626005 309 ntTSL 3 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
RIMBP3Q9UFD9 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AC027088.4-201ENST00000611559 1947 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 HMGB1P20-201ENST00000402555 677 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AC245884.2-201ENST00000426257 404 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AURKAPS1-201ENST00000451805 1212 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 RPS29P22-201ENST00000472363 168 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 STRADBP1-201ENST00000478954 1281 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 RPL7P6-201ENST00000480903 738 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AC147055.3-201ENST00000510547 851 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AL356801.1-201ENST00000559320 294 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AC005332.4-201ENST00000592752 579 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms