Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 PLEKHA3P1-201ENST00000598554 894 ntBASIC9.49□□□□□ -0.89
SIN3AQ96ST3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 FO082842.1-201ENST00000423552 1370 ntBASIC9.49□□□□□ -0.89
SIN3AQ96ST3 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 MAPK10-357ENST00000641831 2858 ntBASIC9.48□□□□□ -0.89
SIN3AQ96ST3 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AC073046.2-201ENST00000604756 527 ntBASIC9.48□□□□□ -0.89
SIN3AQ96ST3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 SSXP3-201ENST00000442971 1300 ntBASIC9.48□□□□□ -0.89
SIN3AQ96ST3 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 AC005332.9-201ENST00000620266 2921 ntBASIC9.48□□□□□ -0.89
SIN3AQ96ST3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC9.48□□□□□ -0.89
SIN3AQ96ST3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC005618.1-201ENST00000606901 3148 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC013488.1-201ENST00000526618 1838 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 MED28P4-201ENST00000433137 572 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 YRDCP3-201ENST00000456507 480 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 RN7SL836P-201ENST00000476140 296 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC138517.1-201ENST00000515724 568 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC063977.7-201ENST00000594454 337 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AL589765.6-201ENST00000601909 549 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC004805.3-201ENST00000603178 310 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC068213.1-201ENST00000625124 226 ntBASIC9.47□□□□□ -0.89
SIN3AQ96ST3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SIN3AQ96ST3 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
SIN3AQ96ST3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.89
SIN3AQ96ST3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SIN3AQ96ST3 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SIN3AQ96ST3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
SIN3AQ96ST3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SIN3AQ96ST3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms