Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 ENO1P4-201ENST00000416471 1785 ntBASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 AC005839.1-201ENST00000624148 3213 ntBASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM1Q2M3G4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 STAG3L4-201ENST00000352103 530 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 RNA5SP485-201ENST00000365053 119 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AL360013.1-201ENST00000419031 858 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 SULT1D1P-201ENST00000458020 882 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 GM2AP2-201ENST00000491764 562 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 SCARNA5-201ENST00000516201 276 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC008429.2-201ENST00000523057 864 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 SNORA70D-201ENST00000578836 135 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC093635.1-201ENST00000609028 555 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC026951.2-201ENST00000613847 241 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AC241584.2-201ENST00000637142 2090 ntBASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SHROOM1Q2M3G4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 MRPS6P2-201ENST00000381143 370 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 MIR199B-201ENST00000384849 110 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 RN7SKP240-201ENST00000410583 375 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 RN7SKP296-201ENST00000411185 341 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 AC115283.1-201ENST00000427353 400 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 CRYGGP-201ENST00000443337 145 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 RPL23AP64-201ENST00000469465 435 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 PFN1P8-201ENST00000497012 543 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 AC091874.2-201ENST00000505889 720 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 ZNF519P4-201ENST00000514008 125 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 AC006512.2-201ENST00000543250 486 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 AL591767.3-201ENST00000554632 525 ntBASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms