Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC092601.1-201ENST00000444526 383 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 RPS18P1-201ENST00000447840 458 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 RN7SL393P-201ENST00000463588 296 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 PGBD4P1-201ENST00000473644 407 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AC117394.1-201ENST00000477323 567 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AC015524.1-201ENST00000491585 472 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 RN7SL649P-201ENST00000496974 275 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AC114324.2-202ENST00000503812 134 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AC138517.1-201ENST00000515724 568 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 RNA5SP278-201ENST00000517055 102 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 OR4A21P-201ENST00000532759 944 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 MIR4732-201ENST00000581873 76 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 MIR212-201ENST00000586026 110 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AP003072.5-201ENST00000623872 773 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 CTAGE11P-201ENST00000451540 2353 ntBASIC6.2□□□□□ -1.42
NPIPA3F8WFD2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 RN7SKP47-201ENST00000365347 328 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 RN7SKP38-201ENST00000410782 309 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 RN7SL83P-201ENST00000468131 297 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 RPS3AP49-201ENST00000472161 790 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC095057.1-201ENST00000507583 168 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 RNA5SP318-201ENST00000516352 92 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 RPL7AP69-201ENST00000595306 806 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 DIMT1P1-201ENST00000603970 763 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC005514.1-201ENST00000623521 208 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC130448.2-201ENST00000624082 374 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC241584.2-201ENST00000637142 2090 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC007938.1-201ENST00000562524 2902 ntBASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA3F8WFD2 AC010132.4-201ENST00000569883 1368 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AL512329.1-201ENST00000404600 1592 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC005839.1-201ENST00000624148 3213 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms