Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 AC008870.2-201ENST00000568262 1024 ntBASIC8.52□□□□□ -1.05
CFAP99D6REC4 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 BNIP3P9-201ENST00000603714 553 ntBASIC8.52□□□□□ -1.05
CFAP99D6REC4 AL135999.3-201ENST00000610501 812 ntBASIC8.52□□□□□ -1.05
CFAP99D6REC4 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC8.52□□□□□ -1.05
CFAP99D6REC4 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 AC069209.1-201ENST00000619282 651 ntBASIC8.52□□□□□ -1.05
CFAP99D6REC4 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 TTC3P1-201ENST00000399586 6081 ntBASIC8.52□□□□□ -1.05
CFAP99D6REC4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 AC017104.4-201ENST00000636283 1592 ntBASIC8.52□□□□□ -1.05
CFAP99D6REC4 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CFAP99D6REC4 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CFAP99D6REC4 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 TMSB4XP4-201ENST00000323496 618 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 SNORA4.1-201ENST00000364263 144 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 Y_RNA.453-201ENST00000384223 109 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 MIR185-201ENST00000385288 82 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AL122008.2-201ENST00000412915 570 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AL513302.1-201ENST00000415679 428 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AL359094.1-210ENST00000432554 730 ntTSL 3 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC242426.1-201ENST00000435270 960 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 PSAT1P4-201ENST00000466500 526 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC146507.1-201ENST00000468335 354 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 SETP21-201ENST00000514799 892 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 FABP5P7-201ENST00000524732 405 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 YWHABP2-201ENST00000540201 713 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC092747.2-201ENST00000545069 983 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 AL049870.4-201ENST00000555741 486 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC091489.2-201ENST00000566263 604 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC026150.3-201ENST00000602595 499 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC079315.1-201ENST00000602952 623 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC241377.2-202ENST00000636462 997 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC241585.4-201ENST00000640951 686 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
CFAP99D6REC4 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CFAP99D6REC4 AC124045.1-201ENST00000606008 1953 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 LINC00663-203ENST00000586885 2546 ntBASIC8.51□□□□□ -1.05
CFAP99D6REC4 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms